Figure 1

Multiple sequence alignment. The sequence of the A^vy and Cabp^IAP LTR insertions are compared to the IAPLTR1_Mm consensus sequence. A^vy shares 98.5% sequence identity with Cabp^IAP (85% sequence identity over the length of Cabp^IAP). Colors indicate base changes from consensus (A = red, T = blue, C = yellow, G = green).