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Table 2 Summary statistics of alternative splicing in P. patens genes

From: Reannotation and extended community resources for the genome of the non-seed plant Physcomitrella patens provide insights into the evolution of plant gene structures and functions

  # Assemblies % Assemblies # Sub clusters % Sub clusters # Genes % Genes
involved in alt-splicing 12,941 27.21 5,195 13.28 5,177 14.65
alt_acceptor 4,443 34.33 1,649 31.74 1,657 32.01
alt_donor 3,940 30.45 1,414 27.22 1,433 27.68
alternate_exon 2,423 18.72 886 17.05 908 17.54
ends_in_intron 989 7.64 836 16.09 836 16.15
retained_exon 800 6.18 552 10.63 574 11.09
retained_intron 2,692 20.8 2,055 39.56 2,082 40.22
skipped_exon 810 6.26 552 10.63 575 11.11
spliced_intron 3,523 27.22 2,055 39.56 2,080 40.18
starts_in_intron 1,162 8.98 1,010 19.44 1,033 19.95
  1. Overview of the alternative splicing events observed in P. patens using the PASA software and ~300,000 ESTs.