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Table 3 Putative SNPs in 69 of the 1,950 nontoxin and nine of the 75 toxin sequences

From: The venom-gland transcriptome of the eastern coral snake (Micrurus fulvius) reveals high venom complexity in the intragenomic evolution of venoms

Transcript

Type

Coverage

Position

SNP%

Amino acid

 

40S ribosomal protein S14

Nontoxin

762

292

52.0

D

 

40S ribosomal protein S18

Nontoxin

284

424

47.2

N

 

40S ribosomal protein S23

Nontoxin

510

97

51.2

K

 

6-phosphogluconate dehydrogenase

Nontoxin

33

624

54.5

V

 

60S ribosomal protein L29

Nontoxin

411

45

51.3

K

 

60S ribosomal protein L32

Nontoxin

525

332

47.8

K

 

Actin-related protein 2/3 complex subunit 3

Nontoxin

30

255

50.0

R

 

Alanine aminotransferase 2-like protein

Nontoxin

23

241

43.5

T

 

Alpha globin

Nontoxin

26

435

50.0

F →L

 

Aminopeptidase N

Nontoxin

32

2,592

46.9

R →C

 

Annexin A2

Nontoxin

66

302

42.4

T →A

 

Annexin A4

Nontoxin

286

248

44.4

A

 

Annexin A5

Nontoxin

99

236

50.5

S

 

ATP synthase H + transporting mitochondrial F0

Nontoxin

109

178

45.9

L

 

Bifunctional heparan sulfate N-deacetylase/

Nontoxin

20

2,445

45.0

M →T

 

N-sulfotransferase 2-like protein

      

C4orf34

Nontoxin

1,021

175

48.5

A

 

Caprin-1

Nontoxin

46

1,327

45.7

S →P

 

Cell cycle progression protein 1

Nontoxin

22

708

45.5

G

 
  

52

2,286

42.3

K →E

 

Cellular nucleic acid-binding protein

Nontoxin

83

156

56.6

T

 

Chloride intracellular channel protein 1

Nontoxin

112

447

58.0

D

 

Clathrin interactor 1

Nontoxin

36

1,731

50.0

P

 

Cyclic AMP-responsive element-binding protein 3

Nontoxin

25

482

44.0

D

 

Cytochrome c oxidase subunit 4

Nontoxin

76

227

47.4

E →A

 

Dynactin subunit 6 1

Nontoxin

35

424

51.4

I

 

Ectonucleoside triphosphate diphosphohydrolase 7

Nontoxin

27

901

48.1

K →E

 

Endoplasmic reticulum oxidoreductin 1-Lbeta

Nontoxin

260

1,247

54.6

G

 

EPS8

Nontoxin

49

2,112

49.0

Q →H

 

Eukaryotic initiation factor 4A-1

Nontoxin

29

409

44.8

H

 
  

24

496

41.7

R

 
  

32

559

53.1

D

 

Eukaryotic translation elongation factor 1 gamma

Nontoxin

313

908

50.5

I

 

Eukaryotic translation initiation

Nontoxin

43

73

41.9

I

 
  

40

1,067

47.5

H

 

Eukaryotic translation initiation factor 2 subunit

Nontoxin

37

1,172

51.4

L

 

Eukaryotic translation initiation factor 3

Nontoxin

42

3,200

52.4

G

 

Eukaryotic translation initiation factor 5A-1

Nontoxin

71

77

45.1

D

 
  

75

86

45.3

T

 
  

98

143

48.0

N

 
  

139

384

56.1

R

 
  

108

447

52.8

S

 
  

72

486

54.2

T

 

Fructose-1,6-bisphosphatase 1

Nontoxin

54

1,078

44.4

R

 

GABA

Nontoxin

31

144

45.2

R

 
  

42

159

54.8

D

 

Guanine nucleotide-binding protein

Nontoxin

30

569

46.7

A →T

 

Guanine nucleotide-binding protein subunit beta-2

Nontoxin

541

149

51.2

T

 

Hydroxyacylglutathione hydrolase

Nontoxin

21

190

52.4

W →R

 
  

23

709

47.8

S →P

 

Integrin-linked protein kinase

Nontoxin

29

1,205

55.2

A

 

Interferon-related developmental regulator 2

Nontoxin

22

709

45.5

A →T

 
  

23

709

47.8

S →P

 

Integrin-linked protein kinase

Nontoxin

29

1,205

55.2

A

 

Interferon-related developmental regulator 2

Nontoxin

22

709

45.5

A →T

 

LAG1 longevity assurance protein 2

Nontoxin

41

896

53.7

T

 

LAMTOR2

Nontoxin

81

468

53.1

L

 

LIM domain and actin-binding protein

Nontoxin

28

1,516

50.0

V →A

 

Lysine-specific histone demethylase 1B

Nontoxin

70

122

44.3

D →G

 

Lysosomal cobalamin transporter

Nontoxin

27

184

48.1

A

 

Malate dehydrogenase

Nontoxin

68

1,059

57.4

L

 

Mannose-1-phosphate guanyltransferase beta

Nontoxin

32

698

53.1

P →S

 

Microspherule protein 1

Nontoxin

24

665

50.0

V →A

 

Minor histocompatibility antigen H13 1

Nontoxin

452

1,164

53.5

P →L

 

MTP4

Nontoxin

1,664

503

59.3

D

 
  

1,480

1,621

49.8

P →S

 

NADH dehydrogenase

Nontoxin

40

213

40.0

I →V

 

NADPH-cytochrome P450 oxidoreductase

Nontoxin

28

286

53.6

T

 

Nuclease-sensitive element-binding protein 1

Nontoxin

91

675

56.0

R

 

Polyubiquitin-C isoform 2

Nontoxin

892

350

57.4

G

 
  

637

560

52.3

F

 
  

593

635

51.8

K

 
  

774

917

52.8

A

 
  

697

950

49.6

S

 

Proteasome

Nontoxin

83

430

59.0

F

 

Proteasome subunit alpha type-6

Nontoxin

48

139

52.1

H

 

Protein disulfide-isomerase A3

Nontoxin

146

196

50.0

C

 

Sarcolemmal membrane-associated protein-3

Nontoxin

21

1,534

42.9

Q

 

SEC31

Nontoxin

110

2,866

46.4

P

 

Serine/threonine-protein phosphatase

Nontoxin

22

1,144

40.9

T →S

 
  

22

1,337

45.5

S

 

Sialin

Nontoxin

23

321

43.5

P

 

Sodium/glucose cotransporter 4

Nontoxin

26

579

57.7

S →C

 
  

26

580

57.7

S →T

 

Stress-induced-phosphoprotein 1

Nontoxin

22

455

50.0

L

 
  

21

716

52.4

K

 

Transmembrane emp24 domain-containing

Nontoxin

347

595

46.1

Y

 

Tubulin beta-5 chain

Nontoxin

27

1,340

44.4

A

 

V-type proton ATPase catalytic subunit A

Nontoxin

63

1,344

55.6

I

 

Y box binding protein 1

Nontoxin

91

811

59.3

R

 

YTH domain family protein 1

Nontoxin

25

1,347

44.0

P

 

C-type lectin 1a

Toxin

7,320

360

55.1

G

 

C-type lectin 2

Toxin

130

598

48.5

N

 

Cysteine-rich with EGF-like domain 1

Toxin

48

257

50.0

K

 
  

82

949

45.1

T

 

Kunitz inhibitor 1a

Toxin

12,402

280

42.5

G →R

 

L-amino acid oxidase 1a

Toxin

1,850

769

55.0

Y

 
  

3,094

1,158

41.2

H →Q

 

Long chain neurotoxin 3

Toxin

7,081

402

40.1

V →I

 

Phospholipase A2 31

Toxin

20

62

40.0

S

 

Phospholipase A2 9

Toxin

68

44

50.0

N →I

 

Venom nerve growth factor 1a

Toxin

3,689

316

49.3

P →S

 
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BMC Genomics

ISSN: 1471-2164

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