Table 6 qPCR validation of microarray results
From: Solanum torvum responses to the root-knot nematode Meloidogyne incognita
ID | Function | Fold change qPCR | Exp. trend qPCR | Fold change chip | Exp. trend chip | Consistency among qPCR and chip |
|---|---|---|---|---|---|---|
Tor5_c3883 | Wound-ind. Prot win1 | 1.88 | + | 3.86 | + | YES |
Tor5_rep_c1712 | Acidic endochitinase | 1.24 | + | 2.12 | + | YES |
Tor5_c8583 | Class2 chitinase | 5.22 | + | 3.44 | + | YES |
Tor5_c6621 | Class v chitinase | 3.37 | + | 2.56 | + | YES |
Tor5_rep_c483 | Ent-kaurene ox | 0.66 | - | 0.49 | - | YES |
Tor5_c3988 | Ggdp synth. | 0.51 | - | 0.39 | - | YES |