Skip to main content
Figure 4 | BMC Genomics

Figure 4

From: RNA-Seq effectively monitors gene expression in Eutrema salsugineum plants growing in an extreme natural habitat and in controlled growth cabinet conditions

Figure 4

Influence of genotype and location on Eutrema gene expression. (A) Number of genes up- or down-regulated in pair-wise comparisons between Shandong cabinet (SC), Yukon cabinet (YC), and Yukon field (YF) plant groups. 2,989 DEGs are indicated on PCA biplot (PC2 vs. PC3) using the 17 categories described in Table 5. Genes not differentially expressed are plotted as grey points and DEGs are shown in color and grouped as follows: (B) Genes in Categories 1 to 6, which are differentially regulated between a single, pair-wise comparison of the three plant groups, (C) Genes in Categories 7 to 12, which are differentially regulated in two pair-wise comparisons and (D) Genes in Categories 13 to 17 representing genes differentially regulated in all three possible pair-wise comparisons between plant groups.

Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us