Table 1 Sequence statistics for transcripts with multiple k-mer assemblies combined and with BLAST matches to Ensembl commelinid reference proteins
Assembly | No. of | Median | N50 | Mean | Longest transcript |
|---|---|---|---|---|---|
| Â | transcripts | (bp) | (bp) | (bp) | (bp) |
Prestige multiple assemblies combined with Oases | 265590 | 678 | 1353 | 899 | 18330 |
378 multiple assemblies combined with Oases | 241,129 | 625 | 1253 | 835 | 11681 |
Prestige transcripts with BLAST match to Ensembl commelinid proteins | 64,040 | 972 | 1499 | 1145 | 12,236 |
378 transcripts with BLAST match to Ensembl commelinid proteins | 57,248 | 919 | 1422 | 1090 | 11,681 |