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Table 1 Wallemia ichthyophaga (EXF-994) genome assembly statistics and comparison with Wallemia sebi (adapted from [4] or calculated from the genomic data published online [76])

From: Genome and transcriptome sequencing of the halophilic fungus Wallemia ichthyophaga: haloadaptations present and absent

Statistic W. ichthyophaga W. sebi
Coverage >270× 71×
Genome assembly size (Mb) 9.625 9.82
Number of scaffolds 82 56
Scaffold N50 (Mb) 0.44 0.34
Number of contigs 101 114
Contig N50 (Mb) 0.35  
CDS total length (Mb) 7.083 (73.59% of genome) 6.701 (68.39% of genome)
CDS average size (bp) 1450 1268
Predicted protein-coding genes (n) 4884 5284
Predicted proteins, average length (aa) 483 423
Exon total length (Mb) 7.083  
Exon total number 16670  
Exon average length (bp) 424 410
Introne total length (Mb) 0.719  
Introne total number 11786  
Introne average length (bp) 61 55
GC content (%) 45.35 40.01
GC content of CDS (%) 47.51 42.06
Repeat content (kb) 160.929 (1.67% of genome)  
- Tandem repeats (kb) 85.47  
- DNA transposons (kb) 84.77  
tRNA (kb) 11.55