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Table 5 Hybrid and PacBio-only assembly statistics

From: Efficient and accurate whole genome assembly and methylome profiling of E. coli

Correction method Starting PacBio coverage Contigs N50 Mean Max Total bases Scaffolds N50 Mean Max Total bases
Ion 110X 25 549762 188222 793657 4705573 23 694467 204622 1763628 4706308
  185X 31 360777 153272 869306 4751442 27 1231116 176143 1631314 4755875
MiSeq 110X 42 174522 107856 364773 4529989 30 328144 151322 588420 4539669
  185X 49 140368 92321 349122 4523744 36 349122 125872 648829 4531394
Preassembler 110X 22 543086 212632 2026296 4677908 19 696126 246383 2200813 4681278
  185X 21 737479 224642 1239560 4717483 21 737479 224642 1239560 4717483