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Table 8 Oligomers for EMSA of PRE-derived mutants

From: PuF, an antimetastatic and developmental signaling protein, interacts with the Alzheimer’s amyloid-β precursor protein via a tissue-specific proximal regulatory element (PRE)

Oligomer

Forward (F) 5′ to 3′a

Reverse (R) 5′ to 3′

PRE (WT)

5-TCGAGTGCCGAGCGGGGTGGGCCGGATCAG-3

5-CTGATCCGGCCCACCCCGCTCGGCACTCGA-3

M1

5-TCGAGTGCCGAGCGGGGTGGTA CC GATCAG-3

5-CTGATCG GTA CCACCCCGCTCGGCACTCGA-3

M4

5-TCGAGTGCCGAGCGGGGTGGGCCT GTA CAG-3

5-CTGTA CA GGCCCACCCCGCTCGGCACTCGA-3

M2

5-TCGAGTGCCGAGCGCT GTGGGCCGGATCAG-3

5-CTGATCCGGCCCACAG CGCTCGGCACTCGA-3

M3

5-TCGAGTCG CGAGCGGGGTGGGCCGGATCAG-3

5-CTGATCCGGCCCACCCCGCTCGCG ACTCGA-3

M4

5-TCC ATG GCCGAGCGGGGTGGGCCGGATCAG-3

5-CTGATCCGGCCCACCCCGCTCGGCCA TG GA-3

M6

5-TCGAGTGCCGAT CGGGGTGGGCCGGATCAG-3

5-CTGATCCGGCCCACCCCGA TCGGCACTCGA-3

M7

5-TCGAGTC CG GAGCGGGGTGGGCCGGATCAG-3

5-CTGATCCGGCCCACCCCGCTC CGG ACTCGA-3

  1. aUnderlined bases have been mutated from wildtype PRE.