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Table 2 Statistics of transcriptome reference assembly and annotation

From: Gene expression changes leading extreme alkaline tolerance in Amur ide (Leuciscus waleckii) inhabiting soda lake

Assembly

Number of contigs

64,603

Maximum contig length

16,177 bp

Minimum contig length

201 bp

Average contig length

879 bp

Median contig length

404 bp

N50 length

1,776 bp

Annotation

Contigs with blast hits on NR

27,724

Contigs with blast hits on Uniprot

23,111

Contigs with blast hits on D.rerio protein

26,611

Unigenes with blast results

20,371

Contigs with GO terms

22,460

Unigenes with GO terms

14,326