Repeat size | Counts | |||||
---|---|---|---|---|---|---|
Musa A | Musa B | Musa A* | ||||
‘Pahang’ | % | PKW | % | ‘Calcutta 4’ | % | |
2-mers | 25,893 | 74 | 22,908 | 75 | 9,335 | 33 |
3-mers | 5,245 | 15 | 4,571 | 15 | 8,988 | 32 |
4-mers | 1,027 | 3 | 798 | 3 | 3,257 | 12 |
5-mers | 505 | 1 | 390 | 1 | 1,923 | 7 |
6-mers | 956 | 3 | 749 | 2 | 2,129 | 8 |
7-mers | 266 | 1 | 220 | 1 | 797 | 3 |
8-mers | 427 | 1 | 394 | 1 | 666 | 2 |
9-mers | 192 | 1 | 225 | 1 | 555 | 2 |
10-mers | 360 | 1 | 344 | 1 | 296 | 1 |
Total number of repeats | 34,871 | 30,599 | 27,946 | |||
Total number of repeat bases | 2,095,593 | 1,955,541 | 1,003,716 | |||
genome sized (bp) | 472,960,417 | 341,431,243 | 98,538,911 | |||
SSR bps/Kbp genome | 4.44 | 5.73 | ||||
SSRs/Kbp genome | 0.074 | 0.09 |