Table 4 Main characteristics of the new MITEs identified using de novo methods
Host | Putative IS | Family | Size | Copy number | IR | DR |
|---|---|---|---|---|---|---|
M. hungatei | ISHmu1 | ? | 136 | 6 | 15 | 4 |
T. kodakarensis | ISTko3 | ? | 274 | 5 | 14 | 0 |
H walsbyi | ISHma7 | IS200/605 | 368 | 17 | 0 | 0 |
H walsbyi | ISHwa2 | IS4 | 237 | 34 | 17 | 5 |
H walsbyi | ISHma12 | IS200/605 | 570 | 13 | 0 | 0 |
H walsbyi | ISHwa6 | IS1595 | 165 | 7 | 25 | 8 |
M. burtonii | IsMbu10 | IS5 | 185 | 5 | 16 | 0 |
M. barkeri | ISMba19 | IS5 | 147 | 5 | 15 | 0 |
M. barkeri | ISMba11 | IS1634 | 247 | 23 | 20 | 6 |
M. mazei | ISMba17 | IS200/605 | 418 | 5 | 0 | 0 |
M. mazei | ISMma9 | IS630 | 89 | 5 | 16 | 0 |
M. acetivorans | ISMac10 | IS1634 | 249 | 15 | 18 | 0 |
M. acetivorans | ISMac2 | IS1182 | 160 | 14 | 26 | 4 |
M. acetivorans | ISMma12 | IS5 | 140 | 24 | 16 | 3 |
M. acetivorans | ISMac21 | ISL3 | 179 | 6 | 22 | 7 |
M. acetivorans | ISMac15 | IS5 | 252 | 12 | 17 | 0 |
M. acetivorans | ISMac2 | IS1182 | 169 | 7 | 25 | 0 |
N. pharaonis | ISNph22 | IS200/605 | 341 | 2 | 0 | 0 |