From: Genome-scale cold stress response regulatory networks in ten Arabidopsis thalianaecotypes
Ecotype | Unique TFs (Up regulated) | Unique TFs (Down regulated) |
---|---|---|
Cvi | ANAC014, ANAC042, ANAC058, AtHB24, AtHB32, AtMYB103, CUC1, HEC1, HSFB2A, LBD27, LBD35, LD, PIL6, SRL2, At3g20880, At4g00150, At1g09060, At3g11450, At5g45270 | AIL6, ANAC041, ANAC074, ANAC103, ARR2, ASML2, AtHB23, AtMYB11, AtMYB17, AtMYB86, AtNAC3, AtY13, bt5, EMB3008, ETC1, GNC, HAt22, HDG12, IAA18, LBD23, MAF4, MYB113, MYB3, MYB33, MYB92, MYC6.2, NTL9, PAN, PCF1, PUX2, SDG40, SGR1, SPL5, SUVR4, tcp17, TCP3, TGA6, VND1, WOX13, WRKY50, At1g16640, At3g06160, At4g34400, At4g00940, At5g49300, At3g57480, At5g10970, At2g05160, At5g40880, At3g16940, t5g38140, At2g20110, At1g07520, At1g63100, At1g44810, At4g00232, At4g26170, At1g09710, At1g33420, At2g01810, At3g53370, At5g51910, At1g76870, At1g26260, At1g62975, At4g00870, At4g14410, At4g29930, At5g46830, At5g65320 |
Kas.1 | AtGRF3, BPC6, HAt3, HSFA8, IAA29, SSL2, SWN, WRKY3, WRKY32, WRKY66, At3g45260, At1g67310, At2g45460 | AL1, BT4, DUO1, GBF6, HSFB1, HSFB4, MNP, TED5, TIFY3B, U2AF35B, ZBF1, ZFN3, ZFP4, At5G52020, At5G06770, At5G41920, At4G22140, At5G50670, At1G03040, At3G23690 |
Kyo.2 | AtIDD2, CAL1, HAt14, LCL1, PHE2, RAP2.9, SNZ, SPL3, TOC1, At4g18870, At5g51790 | HDT3, PMG1, TRFL6, UNE12, WER1, At5g61190, At4g23800, At2g45800, At1g69170, At1g68920, At2g46510 |
Col-0 | At3G50750, At2G27630, At5G22990, At1G48195, At4G37850 | ACD6, ACS3, CYP71A28, CYP81K1, MEA, MLP28, MYB24, PSRP5, RCK, STR16, XIJ, At3g21570, At5g33260, At2g21930, At5g26930, At5g15620, At3g18840, At1g31370, At2g01031, At2g09850, At2g24930, At1g79120, At4g09070, At3g56600, At5g39150, At2g35300, At1g23570, At5g02140, At1g23060, At3g14750, At1g27300, At3g16840, At3g03920, At2g07671, At1g53060, At5g66230, At5g58570, At5g26690, At1g27330, At1g18720, At5g18850 |
Kond | AGL79, ANAC077, AtGRF6, LBD14, SCL11, TIFY9 (JAZ10), WRKY10, At3g06410, At3g51950, | ADOF2, ANAC097, AtHB27, BME3-ZF, bZIP61, GIF2, HAP3A, HAP5B,ING1, RAP2.11, TGA1, At3g51080, At2g40970, At5g47390 |
Sha | AGL58, ANAC009, SET1, STY2, At4g33880 | AGL24, AGL43, CRF1, ETT, IAA7, LBD38, PHB-1D, PTAC1, SRS8, ZFHD2, At5g02460, At5g41030 |
C24 | ADOF1, ANAC045, ANAC061, ANAC069, AtIDD16, AtIDD5, CDF1, CDF2 , COL2 , DREB2A, HSF A4A, IAA1, LBD32, MP, MYB51, MYB77, RVE2, SPL1R2, SSRP1,SUVH3, WRKY26, WRKY33, WRKY40, WRKY55, At5g51190, At2g17410, At4g17570, At1g26610, At4g15420, At5g26610, At5g12440, At3g52250, At5g06110, At1g20640, At1g64530, At2g18090, At2g37520, At1g01260 , At5g57150 | ANAC065, AtHB16, AtMYB63, BPC5,HSFB2B, LBD22, RGA2, SCL3, ZFHD3, At1g49475, At1g68520, At4g24060, At3g24050, At4g14540, At2g44730, At2g21235 |
Ler | ddf2, HSFC1 | AGL26, ARF21, DAR7, emb2746, LBD1, MYB105, NAI1, ZFP6, At4g31680, At5g12850, At1g75530, At5g41765, At2g17150 |
An.1 | AGL56, RD26, SOC1, SUVH1, tify5a, At1g79700, At4g15250, At2g42150, | AtGRF6, LBD14 , At3g51950 |
Eri | ALC, ANAC011, ANAC019, ANAC044, ANAC046, AtAF2, AtNAC3, AZF2, BPC4, COL9, DAG2, ERF5, ERF8, IAA17, IAA5, MYB59, MYBR1, RAP2.10, SHN3, SHY1, TIFY10B, WRKY22, WRKY27, WRKY28, ZFHD4, At4g01580, At2g40340, At2g40350, At4g32800, At2g45050, At3g49930, At3g60580, At3g08505, At3g14020, At1g25550, At3g12730, At5g01200, At5g05790, At3g21210, At3g53680, At2g18850, At3g21330, At3g23210 , At1g19490 | AtbZIP,BZR2, DAG2 , WOX12, ZFP8, At3g23140, At1g19040 |