Functional group | Gene ID | Gene description | TPM (transcripts per million clean tag) | ||||||
---|---|---|---|---|---|---|---|---|---|
C1 | C2 | C3 | C4 | C5 | C6 | C7 | |||
Photosynthesis | |||||||||
Pbr041327.1 | Photosystem I subunit V | 62.76 | 208.63 | 58.71 | 123.22 | 106.36 | 69.55 | 42.42 | |
Pbr001999.2 | Photosystem I PsaA/PsaB | 1.48 | 1.74 | 5.07 | 12.53 | 4.54 | 30.45 | 20.26 | |
Pbr020992.1 | Photosystem I PsaA/PsaB | 0.62 | 0.80 | 2.82 | 6.942 | 3.08 | 16.94 | 10.13 | |
Pbr031897.1 | F-type H + -transporting ATPase subunit gamma | 17.17 | 49.15 | 12.11 | 41.26 | 32.20 | 17.06 | 16.84 | |
Pbr032910.1 | Photosystem II 13 kDa protein | 14.46 | 30.59 | 4.37 | 15.52 | 15.82 | 10.07 | 8.23 | |
Hormone/signaling | |||||||||
Pbr031954.1 | ACC oxidase 7 | 9.27 | 14.43 | 71.38 | 86.68 | 17.61 | 7.23 | 7.72 | |
Pbr002199.1 | Ethylene receptor | 55.97 | 114.60 | 40.13 | 30.56 | 117.91 | 36.02 | 28.87 | |
Pbr023072.1 | Ethylene receptor | 43.61 | 131.70 | 63.22 | 32.01 | 91.77 | 43.13 | 33.68 | |
Pbr036692.1 | ACC synthase | 38.30 | 18.83 | 11.12 | 15.04 | 29.58 | 3.91 | 4.05 | |
Pbr000435.1 | Ethylene-responsive transcription factor | 14.83 | 4.41 | 3.24 | 8.20 | 9.78 | 2.37 | 4.18 | |
Pbr025988.1 | Ethylene-responsive transcription factor | 0.62 | 0 | 0 | 0.58 | 1.79 | 0 | 0 | |
Pbr030542.1 | Ethylene-responsive transcription factor 1B | 4.82 | 2.27 | 2.11 | 35.67 | 12.25 | 2.84 | 4.94 | |
Pbr021608.1 | PtrAUX6; auxin influx carrier component | 1.73 | 6.41 | 2.25 | 10.32 | 29.44 | 5.33 | 1.77 | |
Pbr013424.1 | PIN6; auxin efflux carrier component | 111.57 | 52.76 | 32.52 | 89.18 | 27.93 | 6.28 | 19.50 | |
Cell wall modification | |||||||||
Pbr036382.1 | Polygalacturonase | 17.67 | 1.60 | 0.28 | 25.84 | 2.06 | 0.47 | 0.13 | |
Pbr014899.1 | Pectinesterase | 7.17 | 2.27 | 1.27 | 0 | 0 | 0 | 0.25 | |
Pbr014900.1 | Pectinesterase | 6.18 | 2.54 | 1.41 | 0 | 0.28 | 0.12 | 0 | |
Pbr033313.1 | Beta-expansin 1a | 163.83 | 69.86 | 189.37 | 93.14 | 147.49 | 139.93 | 167.78 | |
Pbr035305.1 | Pectate lyase | 3.34 | 5.74 | 2.11 | 5.01 | 20.78 | 1.54 | 1.52 | |
Pbr022719.1 | Pectinesterase-2 | 9.02 | 2.14 | 0.28 | 2.41 | 1.65 | 0 | 0 | |
Pbr011421.1 | Alpha-expansin 15 | 7.66 | 3.21 | 0.85 | 3.95 | 6.88 | 2.13 | 2.41 | |
Pbr005280.1 | Pectate lyase | 5.81 | 0.94 | 1.55 | 17.55 | 9.50 | 1.54 | 0.63 | |
Pbr039133.1 | Pectate lyase | 10.39 | 4.01 | 1.83 | 0.29 | 0.28 | 0.24 | 0.38 | |
Pbr000187.1 | Xyloglucan endotransglucosylase/hydrolase | 1.48 | 2.81 | 1.27 | 2.12 | 5.09 | 0.24 | 0.25 | |
Pbr042842.1 | Xyloglucan endotransglucosylase/hydrolase | 6.18 | 6.28 | 2.53 | 4.34 | 11.01 | 1.30 | 0.89 | |
Pbr040203.1 | xyloglucan endotransglycosylase | 6.18 | 5.61 | 3.66 | 3.76 | 4.95 | 1.42 | 1.14 | |
Transcription factors | |||||||||
Pbr029902.1 | AP2 domain-containing transcription factor | 0.49 | 2.54 | 1.41 | 3.18 | 10.59 | 2.61 | 0.89 | |
Pbr022669.1 | MYB 12 transcription factor | 1.24 | 1.74 | 0.28 | 1.83 | 4.27 | 1.42 | 1.14 | |
Pbr002230.1 | WRKY transcription factor | 36.82 | 6.55 | 0.42 | 11.96 | 6.33 | 0.47 | 36.82 | |
Pbr036688.1 | WRKY transcription factor | 38.18 | 6.81 | 0.42 | 12.44 | 6.47 | 0.47 | 38.18 | |
Pbr010864.1 | SCL domain class transcription factor | 873.50 | 401.50 | 374.51 | 173.06 | 78.7 | 144.67 | 210.83 | |
Carbohydrate biosynthesis and metabolism | |||||||||
Pbr003011.1 | Alpha-amylase | 293.80 | 76.67 | 33.09 | 255.11 | 32.06 | 24.88 | 25.96 | |
Pbr008092.1 | Sugar transporter | 225.35 | 58.90 | 299.04 | 149.06 | 74.02 | 104.74 | 167.15 | |
Pbr013916.1 | Sorbitol dehydrogenase, | 25.45 | 19.23 | 61.67 | 45.99 | 20.09 | 44.31 | 73.07 | |
Pbr032770.1 | Sorbitol dehydrogenase | 1.73 | 0.80 | 0.28 | 1.64 | 0.55 | 0.12 | 0.63 | |
Pbr013912.1 | Sorbitol dehydrogenase | 9.88 | 13.49 | 14.50 | 60.07 | 42.93 | 28.91 | 15.96 | |
Pbr013913.1 | Sorbitol dehydrogenase | 177.79 | 73.46 | 73.92 | 187.82 | 174.87 | 59.48 | 110.42 | |
Pbr001279.1 | UDP-glucosyltransferase| | 57.95 | 22.17 | 30.13 | 14.46 | 17.20 | 6.87 | 11.14 | |
Pbr019918.1 | Glycosyl Hydrolase | 51.03 | 4.01 | 5.91 | 8.58 | 8.67 | 2.73 | 2.15 | |
Pbr001745.1 | Sucrose phosphate syntase | 1.73 | 4.274 | 6.476 | 1.928 | 6.742 | 2.133 | 1.773 | |
Pbr008035.1 | Sucrose phosphate syntase | 2.842 | 7.88 | 10.7 | 4.435 | 11.97 | 3.555 | 3.546 | |
Pbr014962.1 | Glycosyltransferase QUASIMODO1 | 45.34 | 67.32 | 20.98 | 35.87 | 76.09 | 33.41 | 21.78 | |
Pbr033075.1 | Glycosyltransferase QUASIMODO1 | 61.28 | 88.15 | 26.19 | 44.54 | 100.58 | 38.51 | 22.03 | |
Pbr036396.1 | Glucose-1-phosphate adenylyltransferase | 49.54 | 42.47 | 23.37 | 43.10 | 54.35 | 24.17 | 26.34 | |
Pbr005718.1 | Beta-fructofuranosidase | 10.13 | 3.47 | 0.70 | 0.39 | 0.69 | 0 | 0.89 | |
Other differentially regulated genes | |||||||||
Pbr009422.1 | Probable E3 ubiquitin-protein ligase | 8.15 | 1.74 | 27.60 | 0.87 | 9.22 | 2.01 | 2.91 | |
Pbr039793.1 | Acyltransferase | 45.01 | 11.62 | 17.60 | 7.91 | 20.64 | 3.32 | 4.31 | |
Pbr032411.1 | Cysteine-rich receptor-like protein kinase | 28.91 | 7.88 | 9.86 | 28.06 | 4.13 | 0.59 | 1.14 | |
Pbr013236.1 | Protein IDA | 60.88 | 13.89 | 9.29 | 32.01 | 3.16 | 0 | 0.38 | |
Pbr012802.1 | Predicted protein | 5.19 | 2.00 | 7.88 | 2.41 | 4.27 | 1.19 | 1.52 | |
Pbr012908.1 | Predicted protein | 4.20 | 1.34 | 7.74 | 2.41 | 11.56 | 2.84 | 1.01 | |
Pbr042050.1 | Predicted protein | 194.34 | 41.00 | 13.37 | 143.47 | 5.78 | 0.83 | 1.52 | |
Pbr020727.1 | Unknown | 546.95 | 188.06 | 250.61 | 93.23 | 87.78 | 245.15 | 177.53 |