Table 1 Number and type of loci, genetic distance and marker density for refined 85P map
From: Construction of a reference genetic linkage map for carnation (Dianthus caryophyllus L.)
New LG | Previous LG (Yagi et al. [15]) | Total No. of SSR loci | Mapped SSR loci (in Yagi et al. [15]) | New SSR loci | Length of LGs(cM) | Marker density (loci/cM) | Common SSR loci between 85P and NP map | |||
|---|---|---|---|---|---|---|---|---|---|---|
Locus names | Subtotal | |||||||||
| Â | GS- | CES- | NES- | |||||||
SSR resource | Â | |||||||||
| Â | Â | Â | Genomic, EST | Genomic | EST | EST | Â | Â | Â | Â |
85P_1 | B1 | 48 | 17 | 10 | 9 | 12 | 31 | 111.9 | 0.43 | 12 |
85P_2 | B2 | 16 | 9 | 1 | 3 | 3 | 7 | 97.1 | 0.16 | 7 |
85P_3 | B3 | 38 | 17 | 4 | 7 | 10 | 21 | 70.2 | 0.54 | 10 |
85P_4 | B4 | 39 | 21 | 9 | 7 | 2 | 18 | 73.9 | 0.53 | 14 |
85P_5 | B5 | 24 | 10 | 4 | 2 | 8 | 14 | 64.6 | 0.37 | 4 |
85P_6 | B6 | 29 | 18 | 1 | 5 | 5 | 11 | 72.1 | 0.40 | 5 |
85P_7 | B7 | 27 | 12 | 6 | 1 | 8 | 15 | 66.2 | 0.41 | 7 |
85P_8 | B8 | 36 | 18 | 6 | 4 | 8 | 18 | 66.3 | 0.54 | 8 |
85P_9 | B9 | 25 | 9 | 4 | 2 | 10 | 16 | 65.1 | 0.38 | 3 |
85P_10 | B10 | 32 | 10 | 3 | 7 | 12 | 22 | 56.1 | 0.57 | 6 |
85P_11 | B11 | 19 | 9 | 2 | 3 | 5 | 10 | 81.6 | 0.23 | 4 |
85P_12 | B12 | 28 | 9 | 4 | 7 | 8 | 19 | 52.1 | 0.54 | 8 |
85P_13 | B13 | 18 | 7 | 3 | 2 | 6 | 11 | 33.0 | 0.55 | 13 |
85P_14-1 | B14 | 7 | 3 | 2 | 1 | 1 | 4 | 23.2 | 0.30 | 6 |
85P_14-2 | B16 | 7 | 2 | 0 | 0 | 5 | 5 | 18.4 | 0.38 | 5 |
85P_15-1 | B15 | 13 | 5 | 1 | 4 | 3 | 8 | 10.1 | 1.29 | 11 |
85P_15-2 | no linkage group | 6 | 2 | 2 | 1 | 1 | 4 | 7.7 | 0.78 | 2 |
Total | Â | 412 | 178 | 62 | 65 | 107 | 234 | 969.6 | 0.42 | 125 |