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Table 5 Expression of Cand4 and Cand9 (reads from predicted miRNA) in clinical samples

From: High-throughput sequencing of small RNA transcriptomes reveals critical biological features targeted by microRNAs in cell models used for squamous cell cancer research

Sample 196

Read count (Raw)

Normalized read count

 

196 M

196 T

196 M

196 T

Cand99

159

129

41.19

63.66

Cand209

4

1

1.04

1.60

Sample 240

Read Count (Raw)

Normalized Read Count

 

240 M

240 T

240 M

240 T

Cand99

1076

26

278.77

10.41

Cand209

40

-

10.36

-

Sample 277

Read Count (Raw)

Normalized Read Count

 

277 M

277 T

277 M

277 T

Cand99

391

16

101.30

6.41

Cand209

8

15

2.07

6.01

Sample 296

Read Count (Raw)

Normalized Read Count

 

296 M

296 T

296 M

296 T

Cand99

1566

335

405.72

134.13

Cand209

9

10

2.33

4.00

Sample 306

Read Count (Raw)

Normalized Read Count

 

306 M

306 T

306 M

306 T

Cand99

222

166

57.52

66.46

Cand209

2

3

0.52

1.20

Sample 321

Read Count (Raw)

Normalized Read Count

 

321 M

321 T

321 M

321 T

Cand99

86

170

22.28

68.06

Cand209

-

1

-

0.40

Sample 333

Read Count (Raw)

Normalized Read Count

 

333 M

333 T

333 M

333 T

Cand99

164

985

42.49

394.38

Cand209

-

3

-

1.20

Sample 349

Read Count (Raw)

Normalized Read Count

 

349 M

349 T

349 M

349 T

Cand99

177

50

45.86

20.02

Cand209

-

1

-

0.40

  1. Samples 196, 306, 321 and 333 presented expression levels similar to findings in cells.