Table 1 Assembly and annotation statistics for the H. brasiliensis genome
From: Draft genome sequence of the rubber tree Hevea brasiliensis
Number of scaffolds | 608,017 |
N50 length scaffolds (bp) | 2,972 |
N50 count scaffolds | 23,685 |
Largest scaffold (bp) | 531,465 |
Smallest scaffold (bp) | 484 |
Average scaffold length (bp) | 1,840 |
Number of contigs | 1,223,364 |
Minimum length of contig (bp) | 200 |
GC content of contig (%) | 34.17 |
Repeats length contig (%) | 72.01 |
Number of predicted genes | 68,955 |
Mean gene length (bp) | 1,332 |
Mean predicted ORF length (bp) | 696 |
Longest gene (bp) | 15,597 |
Shortest gene (bp) | 162 |
Highest number of exons/gene | 35 |
Mean exon length (bp) | 238 |
Mean intron length (bp) | 332 |