Skip to main content

Table 1 General features of the D. phosphitoxidans genome*

From: Life based on phosphite: a genome-guided analysis of Desulfotignum phosphitoxidans

Category Amount
DNA contigs/scaffolds 38
DNA total number of bases 4,998,761
  Coding number of bases 4,534,179
  G+C content 51.26%
ORFs, total 4699
  RNA genes 53 (1.13%)
   rRNA genes 6 (0.13%)
   tRNA genes 47 (1.00%)
Protein coding genes 4646 (98.87%)
With assigned functions 3609(76.80%)
Without function prediction 1037 (22.07%)
With COGs 3648 (77.63%)
With KOGs 1430 (30.43%)
With Pfam 3810 (81.80%)
With TIGRfam 1373 (29.22%)
In paralog clusters 3524 (74.99%)
  1. *According to IMG database (https://img.jgi.doe.gov).
  2. ORFs, Open reading frames, coding regions.