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Table 5 Genes related to hormone and calcium signalling were differentially transcribed in compression (CW) and opposite wood (OW) formed in branches

From: Transcriptome profiling of radiata pine branches reveals new insights into reaction wood formation with implications in plant gravitropism

Xylem tissues

Differentially transcribed genes

Representing ESTs

GenBank accession

Log-2 ratios

P-values

CW-autumn

Auxin-induced protein

JWLwB8

FE520292

1.587

0.043

CW-spring

Auxin-regulated protein

JWElD4

FE519586

1.206

0.026

CW-spring

Auxin-regulated protein-like

MWL10D2

FE522886

1.964

0.049

CW-autumn

Auxin-regulated protein-like

MWL5D1

FE522833

2.045

0.044

CW-autumn

Cytokinin-binding protein

JWLuD5

FE520986

1.839

0.049

CW-spring

Ethylene reponse factor-like

MWL23D7

FE522376

2.893

0.051

CW-spring

Ethylene responsive element binding factor

JWEmG12

FE519013

1.103

0.032

CW-spring

Ethylene-forming enzyme

JWEhA9

FE518368

1.392

0.038

CW-autumn

Ethylene-forming enzyme

JWEhC9

FE518368

1.514

0.041

CW-autumn

Gibberellin-induced receptor-like kinase

TWL24D10

FE523925

1.959

0.006

CW-spring

Abscisic acid-induced protein

TWE30F7

FE523634

0.983

0.021

CW-spring

Calcium dependent protein kinase

JWLbH5

FE519684

2.196

0.049

CW-autumn

Calcium dependent protein kinase

JWLbH5

FE519684

1.691

0.050

CW-spring

Calcium/calmodulin-dependent protein kinase

TWL20F6

FE523844

1.832

0.005

CW-autumn

Calcium/calmodulin-dependent protein kinase

TWL20F6

FE523844

1.660

0.039

CW-spring

Calcium-binding EF-hand

JWLxA12

FE521106

1.077

0.018

CW-autumn

Calcium-binding EF-hand

JWLrA7

FE520012

2.045

0.048

CW-spring

Calcium-binding protein

MWL14A2

FE523065

0.086

0.036

CW-autumn

Calcium-binding protein

MWL14A2

FE523065

1.853

0.067

CW-spring

Calcium-binding protein-lik

MWL21C7

FE522357

1.053

0.0002

CW-autumn

Calcium-binding protein-lik

MWL21C7

FE522357

1.248

0.016

OW-autumn

Abscisic acid-induced protein

TWE30F7

FE523634

-0.912

0.033

OW-autumn

Calcium-transporting ATPase 2

MWL33C2

FE522634

-1.896

0.048