Table 1 KO and COG classifications in CEG
Abbreviated strain name | No. of essential genes assigned within KO groups | No. of essential genes assigned within COG groups | No. of essential genes assigned within both KO and COG groups | % of essential genes assigned within KO groups. | % of essential genes assigned within COG groups | % of essential genes assigned within either of the two groups |
|---|---|---|---|---|---|---|
aci | 444 | 462 | 432 | 88.98 | 92.59 | 94.99 |
bsu | 214 | 265 | 209 | 78.97 | 97.79 | 99.63 |
eco | 564 | 647 | 558 | 79.21 | 90.87 | 91.71 |
ftn | 331 | 289 | 279 | 84.44 | 73.72 | 86.99 |
hin | 515 | 566 | 478 | 80.22 | 88.16 | 93.93 |
hpy | 220 | 227 | 207 | 68.11 | 70.28 | 74.3 |
mge | 282 | 303 | 270 | 74.02 | 79.53 | 82.68 |
mpu | 262 | 270 | 252 | 84.52 | 87.1 | 90.32 |
mtu | 461 | 535 | 452 | 75.08 | 87.13 | 88.6 |
pau | 257 | 292 | 253 | 76.72 | 87.16 | 88.36 |
sao | 304 | 334 | 302 | 86.61 | 95.16 | 95.73 |
spr | 211 | 225 | 207 | 86.48 | 92.21 | 93.85 |
spu | 286 | 302 | 286 | 94.7 | 100 | 100 |
stm | 189 | 217 | 187 | 82.17 | 94.35 | 95.22 |
stt | 338 | 343 | 337 | 95.75 | 97.17 | 97.45 |
vch | 412 | 475 | 408 | 52.89 | 60.98 | 61.49 |