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Table 2 Enrichment of unigenes in MapMan terms for 12,272 duplicated Yukon unigenes

From: Transcriptome sequencing and microarray design for functional genomics in the extremophile Arabidopsis relative Thellungiella salsuginea (Eutrema salsugineum)

Mapman bin code Mapman term Number of duplicated Yukon unigenes Fisher’s exact test P-value (Bonferroni-corrected)*
29.2.1 protein.synthesis.ribosomal protein 558 1.48E-18
11.1 lipid metabolism – Fatty Acid synthesis and Fatty Acid elongation 89 1.56E-06
29.5 protein.degradation 652 3.28E-05
34 transport 433 1.25E-04
30 signalling 488 2.93E-04
1.1.1.01 PS.lightreaction.photosystem II.LHC-II 52 3.98E-04
20.1.7 stress.biotic.PR-proteins 29 1.00E-03
20.1 stress.biotic 93 1.86E-03
29.3.4 protein.targeting.secretory pathway 95 3.52E-03
1.1.2.01 PS.lightreaction.photosystem I.LHC-I 41 4.32E-03
23.4.010 nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase 21 8.96E-03
20.2.3 stress.abiotic.drought/salt 63 1.17E-02
30.3 signalling.calcium 129 1.20E-02
21 redox.regulation 167 2.28E-02
11.1.012 lipid metabolism.FA synthesis and FA elongation.ACP proteins 18 2.49E-02
17.6.3 hormone metabolism.gibberelin.induced-regulated-responsive-activated 18 2.49E-02
27.3.25 RNA.regulation of transcription.MYB domain transcription factor family 14 2.54E-02
27.3.52 RNA.regulation of transcription.Global transcription factor group 16 2.70E-02
29.1 protein.aa activation 59 2.72E-02
4.02 glycolysis.PGM 10 3.22E-02
  1. *The Bonferroni-corrected Fisher’s exact test P-value that was extracted from MapMan term enrichment analysis using MEFISTO software [101].