The Drosophila early ovarian transcriptome provides insight to the molecular causes of recombination rate variation across genomes

Table 1 mRNA-seq statistics for each sample

Strain	Condition^*	Gross reads	Mapped reads	% mapped	Avg. depth
208	Early	44,938,695	34,472,998	76.71	84.3
208	Late	52,572,707	44,868,154	85.34	119.2
375	Early	67,255,860	48,750,637	72.49	119.0
375	Late	61,344,832	51,546,801	84.03	121.5
375F×208M	Early	61,305,389	50,863,571	82.97	107.3
375F×208M	Late	71,871,368	60,296,814	83.9	122.9
375M×208F	Early	57,532,606	45,646,995	79.34	86.9
375M×208F	Late	50,982,155	37,072,046	72.72	93.5
Combined	Early	231,032,550	179,734,201	77.8	457.2
Combined	Late	236,771,062	193,783,815	81.84	397.4

^*Early and Late indicate Drosophila Early- and Late-ovarian transcriptome, respectively.

ISSN: 1471-2164