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Table 4 Significantly enriched biological processes within the gene-gene interaction network, estimated by GO term enrichment analyses using PANTHER 8.0

From: A systems biology approach using metabolomic data reveals genes and pathways interacting to modulate divergent growth in cattle

Biological process

N reference*

N network (observed)§

N network (expected)#

P value+

Cell communication

1982

347

271

8.60E-06

Signal transduction

1865

325

255

5.25E-05

Cellular process

2742

450

375

6.33E-05

Cell surface receptor signaling pathway

893

169

122

1.45E-03

Cell adhesion

638

126

87

3.97E-03

  1. *Total number of genes in the reference list for the respective biological process.
  2. §Total number of genes in the gene-gene interaction network for the respective biological process.
  3. #Total number of number of genes that would be expected by chance.
  4. +Significance of enrichment calculated by a binomial statistical test and corrected for multiple testing via a Bonferroni correction.