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Table 2 Results of the homology testing for the transcriptome assembly for the adult female Musca domestica ALHF strain

From: A whole transcriptomal linkage analysis of gene co-regulation in insecticide resistant house flies, Musca domestica

Assembly results Total number Unique annotation
Contigs generated   
Non annotated contigs 8229 -
Predicted ORFs 5469 -
5' Partial ESTs 519 -
3' Partial ESTs 171  
Contigs annotated   
No annotation* 184 -
D. melanogaster 5730 4265
Pfam family** 5549 2148
KEGG†† 2795 1967
  1. "Non annotated contig" indicates that no ORF was identified in the contig.
  2. *"No annotation" indicates the presence of an ORF, a start, and a stop codon, but no homology to the Pfam family HMM search, Drosophila melanogaster, or KEGG.
  3. **Pfam HMM A (v26.0) Nov 2011. http://pfam.sanger.ac.uk/.
  4. version r5.46 20 Feb, 2009. http://www.flybase.org/ .
  5. †† Release 62.0 April 1, 2012. http://www.genome.jp/kegg/ .