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Table 3 Arabidopsis genes differentially expressed in torpedo stage embryos from Col-0 and Fe-1/Ler-0 and located in the vicinity of predicted FHE QTL

From: Accession-specific modifiers act with ZWILLE/ARGONAUTE10 to maintain shoot meristem stem cells during embryogenesis in Arabidopsis

Predicted QTL Gene Affy ID Description Col vs Fe/Ler (FC) Predicted QTL
FHE1 AT1G43780 260859_at Serine carboxypeptidase-like 44 -11.1 0.008
  AT1G48180 257493_at unknown protein -3.7 0.038
  AT1G50520 261879_at CYP705A27 (cytochrome P450) 4.1 0.001
FHE2 AT2G13970 265302_at transposable element gene 7.2 0.000
  AT2G14800 267110_at unknown protein 3.8 0.010
  AT2G15325 257438_at Lipid transfer protein (LTP) 5.6 0.007
  AT2G15790 265483_at SQUINT Cyclophilin-40 -5.2 0.000
FHE3 AT2G33220 245169_at similar to MEE4 5.8 0.000
  AT2G33790 267457_at pollen Ole-e1 allergen -5.5 0.001
  AT2G35820 263947_at unknown protein -3.1 0.002
  AT2G36550 263910_at similar to NLI interacting factor -9.3 0.001
FHE4 AT4G39190 252938_at GNS1/SUR4 membrane protein -3.4 0.017
FHE5 AT5G36910 249645_at THIONIN 2.2 16.5 0.002
  AT5G38580 249517_at F-box family protein -3.2 0.014
  AT5G38700 249522_at unknown protein 3.2 0.011
  AT5G38960 249479_at germin-like protein, putative 6.2 0.003
  AT5G39060 258246_s_at transposable element gene 17.0 0.000
  AT5G39100 249495_at GERMIN-LIKE PROTEIN 6 -3.8 0.042
  AT5G39210 249472_at CRR7 4.8 0.044
  AT5G41650 249258_at glyoxalase I family protein 4.2 0.002
  AT5G42280 249645_at DC1 domain-containing protein 3.9 0.000
  1. Affy ID = Affymetrix gene chip identifier, FC = fold change >3.0.