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Table 2 Function of common elements obtained from the high temperature stress experiment and the low oxygen stress experiment

From: Transcriptional responses to temperature and low oxygen stress in Atlantic salmon studied with next-generation sequencing technology

Gene symbol

Gene product

Temperature effect

Metabolic function

Protein function

ADK

Adenosine kinase

Up

ATP/ITP metabolism

ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives

BTD

Biotinidase

Up

Biotin metabolism

Catalytic release of biotin from biocytin, the product of biotin-dependent carboxylases degradation

CREB3L3

cAMP responsive element binding protein 3-like 3

Up

Transcription regulation

Transcription factor that may act during endoplasmic reticulum stress by activating unfolded protein response target genes

CYP1A

Cytochrome P450, family 1, subfamily A

Up

Monooxygenase activity

Oxidization of a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics

GSTA1

Glutathione S-transferase alpha 1

Up

Glutathione metabolic process

Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles

KNG1

Kininogen 1

Up

Inflammatory response

Multiple function, high molecular weight kininogen (HMWK) involved in blood coagulation

RPL10

Ribosomal protein L10

Up

Translation

Component of the large 60S ribosomal subunit

RPL19

Ribosomal protein L19

Up

Translation

Component of the large 60S ribosomal subunit

RPL3

Ribosomal protein L3

Up

Translation

Component of the large 60S ribosomal subunit

TSTD1

Thiosulfate sulfurtransferase (rhodanese)-like domain containing 1

Up

Tumorigenesis?

Highly expressed in liver, possible role in tumorigenesis

BTF3

Basic transcription factor 3

Down

Regulation of transcription

Required for the initiation of transcription

CPN1

Carboxypeptidase N, polypeptide 1

Down

Proteolysis

Protects the body from potent vasoactive and inflammatory peptides released into the circulation

EIF3C/EIF3CL

Eukaryotic translation initiation factor 3, subunit C/-like

Down

Initiation of protein synthesis

Component of the eukaryotic translation initiation factor 3

H2AFV

H2A histone family, member V

Down

Nucleosome assembly

Play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability

HTRA1

High-temperature requirement A serine peptidase 1

Down

Regulation of cell growth/proteolysis

Serine protease with a variety of targets. Regulates the availability of insulin-like growth factors (IGFs)

NDUFS1

NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75 kDa (NADH-coenzyme Q reductase)

Down

Mitochondrial electron transport, NADH to ubiquinone

Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase

PABPC1

Poly(A) binding protein, cytoplasmic 1

Down

mRNA polyadenylation

May be involved in cytoplasmic regulatory processes of mRNA metabolism

PNP

Purine nucleoside phosphorylase

Down

Nucleobase-containing compound metabolic process

Catalyze phosphorolysis of purine nucleosides

PSAP

Prosaposin

Down

Lipid metabolic process

Catabolism of glycosphingolipids with short oligosaccharide groups