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Table 2 Summary of the enriched GO Biological Process terms in SPATS2L and KLF6 coexpression networks

From: Genome-wide transcriptional analysis of T cell activation reveals differential gene expression associated with psoriasis

Biological process in SPATS2L network    
Term Count % p-value
GO:0051276 ~ chromosome organization 5 12.8 1.90E-02
GO:0042273 ~ ribosomal large subunit biogenesis 2 5.1 2.12E-02
GO:0006461 ~ protein complex assembly 5 12.8 2.17E-02
GO:0070271 ~ protein complex biogenesis 5 12.8 2.17E-02
GO:0042254 ~ ribosome biogenesis 3 7.7 2.79E-02
GO:0034622 ~ cellular macromolecular complex assembly 4 10.3 2.99E-02
GO:0034621 ~ cellular macromolecular complex subunit organization 4 10.3 4.01E-02
GO:0006325 ~ chromatin organization 4 10.3 4.63E-02
Biological process in KLF6 network    
Term Count % p-value
GO:0006695 ~ cholesterol biosynthetic process 5 6.33 3.95E-06
GO:0016126 ~ sterol biosynthetic process 5 6.33 1.35E-05
GO:0044271 ~ nitrogen compound biosynthetic process 8 10.13 4.08E-04
GO:0006694 ~ steroid biosynthetic process 5 6.33 4.45E-04
GO:0008203 ~ cholesterol metabolic process 5 6.33 6.01E-04
GO:0016125 ~ sterol metabolic process 5 6.33 8.54E-04
GO:0009070 ~ serine family amino acid biosynthetic process 3 3.80 9.36E-04
GO:0008652 ~ cellular amino acid biosynthetic process 4 5.06 1.28E-03
GO:0008610 ~ lipid biosynthetic process 7 8.86 2.30E-03
GO:0008299 ~ isoprenoid biosynthetic process 3 3.80 3.16E-03
GO:0009309 ~ amine biosynthetic process 4 5.06 4.80E-03
GO:0006094 ~ gluconeogenesis 3 3.80 4.92E-03
GO:0009069 ~ serine family amino acid metabolic process 3 3.80 5.31E-03
GO:0019319 ~ hexose biosynthetic process 3 3.80 7.50E-03
GO:0070814 ~ hydrogen sulfide biosynthetic process 2 2.53 8.41E-03
GO:0070813 ~ hydrogen sulfide metabolic process 2 2.53 8.41E-03
GO:0019344 ~ cysteine biosynthetic process 2 2.53 8.41E-03
GO:0034976 ~ response to endoplasmic reticulum stress 3 3.80 8.97E-03
  1. List of enriched GO terms related to biological process (BP) in the SPATS2L (p-value < 0.05) and KLF6 coexpression networks (p-value < 0.01). For each term, the number of genes present in the network (count), the percentage of enrichment (%) and the associated p-value are indicated.