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Table 2 Genomes used in this study

From: Draft genome sequence of Xanthomonas fragariaereveals reductive evolution and distinct virulence-related gene content

Strain

Host

Disease

Genome size (Mb)

Genbank recordb

Reference

X. albilineans GPE PC73

Sugarcane

Leaf Scald

3.76

[Genbank:NC_013722]

[25]

X. arboricola LMG 19145

Strawberry

Leaf Blighta

4.86

unreleased

Unpublished

X. arboricola LMG 19146

Strawberry

Leaf Blighta

5.09

unreleased

Unpublished

X. arboricola pv. pruni LMG 25862

Apricot, Plum & peach

Bacterial Spot

5.02

unreleased

Unpublished

X. axonopodis (citri) pv. citri 306

Citrus

Bacterial Canker A

5.17

[Genbank:NC_003919]

[26]

X. axonopodis pv. citrumelonis F1 (FL 1195)

Citrumelo

Bacterial Spot

4.97

[Genbank:NC_016010]

[27]

X. axonopodis pv. punicae LMG 859

Pomegranate

Bacterial Blight

4.94

[Genbank:NZ_CAGJ01000000]

[28]

X. campestris (vasicola) pv. musacearum NCPPB 4381

Banana

Bacterial Wilt

5.42

[Genbank:NZ_ACHS01000000]

[29]

X. campestris (vasicola) pv. vasculorum NCPPB 702

Sugarcane

Gumming Disease

4.78

[Genbank:NZ_ACHT00000000]

[29]

X. campestris pv. campestris ATCC 33913

Crucifers

Black Rot

5.08

[Genbank:NC_003902]

[26]

X. campestris pv. campestris 8004

Crucifers

Black Rot

5.15

[Genbank:NC_007086]

[30]

X. campestris pv. campestris B100

Crucifers

Black Rot

5.08

[Genbank:NC_010688]

[31]

X. campestris pv. raphani 756C

Crucifers

Leaf Spot

4.94

[Genbank:NC_017271]

[32]

X. campestris pv. vesicatoria (X. euvesicatoria) 85-10

Pepper & tomato

Bacterial Spot A

5.18

[Genbank:NC_007508]

[33]

X. citri pv. mangiferaeindicae LMG 941

Mango

Bacterial Canker

5.11

[Genbank:NZ_CAHO00000000]

[34]

X. fragariae LMG 25863

Strawberry

Angular Leaf Spot

4.18

[Genbank:AJRZ00000000]

This study

X. fuscans pv. aurantifolii ICPB 11122

Citrus

Bacterial Canker B

4.88

[Genbank:NZ_ACPX00000000]

[35]

X. fuscans pv. aurantifolii ICPB 10535

Citrus

Bacterial Canker C

5.01

[Genbank:NZ_ACPY00000000]

[35]

X. gardneri ATCC 19865

Pepper & tomato

Bacterial Spot D

5.53

[Genbank:NZ_AEQX00000000]

[24]

X. oryzae pv. oryzae KACC 10331

Rice

Bacterial Blight

4.94

[Genbank:NC_006834]

[36]

X. oryzae pv. oryzae MAFF 311018

Rice

Bacterial Blight

4.94

[Genbank:NC_007705]

[37]

X. oryzae pv. oryzae PXO 99A

Rice

Bacterial Blight

5.24

[Genbank:NC_010717]

[38]

X. oryzae pv. oryzicola BLS256

Rice

Leaf Streak

4.83

[Genbank:NC_017267]

[32]

X. perforans 91-118

Tomato

Bacterial Spot C

5.26

[Genbank:NZ_AEQW00000000]

[24]

X. sacchari NCPPB 4393

Sugarcane, insects

 

4.9

[Genbank:NZ_AGDB00000000]

[29]

X. vesicatoria ATCC 35937

Pepper & tomato

Bacterial Spot B

5.53

[Genbank:NZ_AEQV00000000]

[24]

  1. Alphabetic overview of the 26 Xanthomonas strains whose genomes were compared in this study, together with their associated natural hosts and diseases, genome size, Genbank records and relevant literature references, when available. Where the current consensus classification of the organism deviates from the given name in Genbank, the current consensus classification is given between brackets. aDisputed in Vandroemme et al. [39]. bOnly the Genbank records of the chromosomes are given.