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Figure 2 | BMC Genomics

Figure 2

From: The Clostridium small RNome that responds to stress: the paradigm and importance of toxic metabolite stress in C. acetobutylicum

Figure 2

Custom web viewer to analyze the RNA-seq data and predict novel sRNAs in C. acetobutylicum. RNA-seq data screenshots of two predicted candidate sRNAs and their orientation (thick arrows), neighboring genes (→/←) and Rho-independent terminators ( Ϙ) are shown. The sRNA in (A) INTEROP0218 (sCAC381; a predicted Hfq target: see text) was validated by Northern analysis (Figure 5), while (B) sCAC1893 (INTEROP1092) was found to contain σG element (Additional File 1). BuOH- butanol, BA- butyrate, NS- no stress, 30 & 60 min post stress.

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BMC Genomics

ISSN: 1471-2164

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