Table 3 Composition of known repetitive sequence types in the UV-8b BESs
From: A BAC based physical map and genome survey of the rice false smut fungus Villosiclava virens
Type | Number of elements | Length occupied (bp) | Sequence (%)1 |
|---|---|---|---|
Retroelements | 314 | 93126 | 3.07 |
  LINEs | 3 | 306 | 0.01 |
  LTR elements | 311 | 92820 | 3.06 |
   Ty1/Copia | 208 | 62218 | 2.05 |
   Gypsy/DIRS1 | 103 | 30602 | 1.01 |
DNA transposons | 1 | 43 | 0.00 |
  Hobo-activator | 1 | 43 | 0.00 |
Small RNA | 5 | 1199 | 0.04 |
Simple repeats | 723 | 28868 | 0.95 |
Low complexity | 366 | 15336 | 0.51 |