Skip to main content

Table 4 Comparison of genomic features of four Buchnera Mp strains

From: Comparative analysis of genome sequences from four strains of the Buchnera aphidicola Mp endosymbion of the green peach aphid, Myzus persicae

 

       Tobacco

       Non-tobacco

 

USDA

W106

F009

G002

Chromosome

    

Genome Size (bp)

643526

643502

643510

643517

Genic Size (bp)

578745

579254

579211

579216

Intergenic Size (bp)

64781

64248

64299

64301

Genic G + C (%)

26.34

26.34

26.34

26.34

Intergenic G + C (%)

15.72

15.68

15.67

15.67

Protein coding genes (#)

581

581

581

581

Pseudogenes (#)

11

11

12

11

tRNA (#)

32

32

32

32

rRNA (#)

3

3

3

3

Avg. gene length (bp)

988.92

988.96

988.89

988.9

Avg. intergenic length (bp)

118.83

118.1

118.2

118.2

Fold genome coverage

248.51

195.94

130.71

375.71

pLeu

    

Plasmid size (bp)

7802

7802

7800

7799

Protein coding genes (#)

7

7

7

7

pTrp

    

Fragment size (bp)

2438

2437

2438

2438

Protein coding genes (#)

2

2

2

2

  1. “#” indicates a gene/RNA count for an entity category, which distinguishes from other categories measuring length with unit of bp and G+C content (%).