From: Proteomic changes in the base of chrysanthemum cuttings during adventitious root formation
aSpot number | bAccession number | cSpecies | dProtein description | eAbb. | fObserved Mr(kDa)/pI | gSpecificity 5d: 0d | hCov. (%) |
---|---|---|---|---|---|---|---|
Carbohydrate and energy metabolism associated proteins | Â | Â | Â | Â | |||
8 | gi|7708624 | Roussea simplex | ATP synthase beta subunit | AtpB | 50.0/5.4 | −2.36±0.36 | 13 |
51 | gi|6017842 | Simmondsia chinensis | ATP synthase beta subunit | AtpB | 44.1/5.8 | 0d only | 11 |
52 | gi|6017842 | Simmondsia chinensis | ATP synthase beta subunit | AtpB | 49.7/6.0 | 0d only | 14 |
68 | gi|6017842 | Simmondsia chinensis | ATP synthase beta subunit | AtpB | 33.8/7.0 | 0d only | 11 |
15 | gi|2497857 | Brassica napus | Malate dehydrogenase | MDH | 31.4/6.4 | −3.67±0.33 | 4 |
61 | gi|2497857 | Brassica napus | Malate dehydrogenase | MDH | 36.1/6.6 | 0d only | 7 |
18 | gi|1346698 | Spinacia oleracea | Phosphoglycerate kinase | PGK | 46.0/6.1 | −3.33±0.33 | 3 |
28 | gi|1766048 | Arabidopsis thaliana | NAD + dependent isocitrate dehydrogenase subunit 2 | IDH | 42.0/6.8 | −3.57±0.15 | 5 |
35 | gi|255575381 | Ricinus communis | Putative fructose-bisphosphate aldolase | ALDOA | 33.9/5.3 | −3.03±0.19 | 3 |
37 | gi|169039 | Pisum sativum | Aldolase | ALD | 43.8/5.4 | +3.33±0.33 | 8 |
39 | gi|169039 | Pisum sativum | Aldolase | ALD | 50.0/5.4 | 5d only | 10 |
58 | gi|169039 | Pisum sativum | Aldolase | ALD | 46.0/6.1 | 0d only | 10 |
63 | gi|169039 | Pisum sativum | Aldolase | ALD | 20.8/6.9 | 0d only | 10 |
N assimilation and metabolism | Â | Â | Â | Â | Â | ||
36 | gi|152962665 | Lactuca sativa | Glutamate dehydrogenase | GDH | 37.6/5.4 | +2.70±0.41 | 6 |
Lipid metabolism | Â | Â | Â | Â | Â | ||
62 | gi|134944 | Carthamus tinctorius | Stearoyl-ACP desaturase | S-ACP-DES | 35.9/6.7 | 0d only | 7 |
Photosynthesis | Â | Â | Â | Â | Â | Â | |
4 | gi|6716783 | Euphorbia esula | Chlorophyll a/b binding protein precursor | CAB | 28.5/5.3 | −7.26±1.85 | 8 |
12 | gi|100380 | Nicotiana tabacum | Ribulose-bisphosphate carboxylase activase | RCA | 44.1/5.8 | −5.33±0.19 | 7 |
25 | gi|100380 | Nicotiana tabacum | Ribulose-bisphosphate carboxylase activase | RCA | 20.8/6.9 | −2.88±0.31 | 7 |
32 | gi|100380 | Nicotiana tabacum | Ribulose-bisphosphate carboxylase activase | RCA | 21.1/7.2 | −3.00±0.17 | 5 |
31 | gi|47604692 | Freycinetia formosana | RuBisCO large subunit | RbcL | 50.1/6.9 | −2.67±0.67 | 5 |
56 | gi|4754913 | Gossypium hirsutum | Carbonic anhydrase isoform 1 | CA1 | 39.4/6.2 | 0d only | 5 |
59 | gi|15234905 | Arabidopsis thaliana | Magnesium-protoporphyrin IX methyltransferase | CHLM | 35.3/6.4 | 0d only | 3 |
Hormone related | Â | Â | Â | Â | Â | Â | |
6 | gi|222051629 | Lactuca sativa | ACC oxidase 1 | ACO | 37.6/5.4 | −2.31±0.68 | 4 |
45 | gi|728744 | Nicotiana tabacum | Auxin-induced protein PCNT115 | PCNT115 | 40.5/5.9 | 5d only | 4 |
Plant defense | Â | Â | Â | Â | Â | Â | |
7 | gi|255563252 | Ricinus communis | Disease resistance protein RPS5, putative | RPS5 | 43.8/5.4 | −2.78±0.40 | 0 |
33 | gi|77744871 | Populus balsamifera | Temperature-induced lipocalin | TIL | 20.7/5.4 | −3.46±0.288 | 9 |
34 | gi|77744871 | Populus balsamifera | Temperature-induced lipocalin | TIL | 28.5/5.3 | +4.00±0.58 | 9 |
Ascorbate biosynthesis | Â | Â | Â | Â | Â | Â | |
17 | gi|15241945 | Arabidopsis thaliana | GDP-mannose 3,5-epimerase | GME | 39.4/6.2 | −2.60±0.21 | 7 |
Cell structure | Â | Â | Â | Â | Â | Â | |
23 | gi|82394883 | Gerbera hybrid cultivar | Xyloglucan endotransglucosylase | XTH | 35.9/6.7 | −4.00±1.00 | 5 |
54 | gi|17366765 | Petunia hybrida | Actin-depolymerizing factor 2 | ADF2 | 64.7/6.0 | 5d only | 8 |
Protein fate | Â | Â | Â | Â | Â | Â | |
10 | gi|33325121 | Hevea brasiliensis | Eukaryotic translation initiation factor 5A isoform III | eIF-5A | 21.9/5.9 | −3.96±0.44 | 18 |
13 | gi|1709798 | Solanum tuberosum | 26S protease regulatory subunit 6B homolog | PRS6B | 49.7/6.0 | −3.43±0.37 | 4 |
14 | gi|1709798 | Solanum tuberosum | 26S protease regulatory subunit 6B homolog | PRS6B | 64.7/6.0 | −2.46±0.83 | 4 |
40 | gi|1155261 | Arabidopsis thaliana | Eukaryotic release factor 1 homolog | eRF1 | 21.9/5.9 | 5d only | 2 |
2 | gi|46806499 | Oryza sativa Japonica Group | Putative heterogeneous nuclearribonucleoprotein A2 | hnRNPA2 | 20.7/5.4 | +2.44±0.43 | 4 |
Unknown | Â | Â | Â | Â | Â | Â | Â |
5 | gi|168065628 | Physcomitrella patens subsp. patens | Predicted protein |  | 33.9/5.3 | −2.49±0.19 | 7 |
11 | gi|168044242 | Physcomitrella patens subsp. patens | Predicted protein |  | 40.5/5.9 | −2.67±0.44 | 1 |
21 | gi|224111100 | Populus trichocarpa | Predicted protein |  | 35.3/6.4 | −2.19±0.31 | 10 |
22 | gi|326530532 | Hordeum vulgare subsp. vulgare | Predicted protein |  | 36.1/6.6 | −2.50±0.50 | 3 |
27 | gi|224111100 | Populus trichocarpa | Predicted protein |  | 33.8/7.0 | +3.88±0.60 | 10 |
55 | gi|224116012 | Populus trichocarpa | Predicted protein | Â | 31.4/6.4 | 0d only | 15 |
69 | gi|302852099 | Volvox carteri f. nagariensis | Hypothetical protein VOLCADRAFT_98675 | Â | 42.0/6.8 | 0d only | 0 |