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Table 3 Genes that show evidences for positive selection in B. anthracis group

From: PSP: rapid identification of orthologous coding genes under positive selection across multiple closely related prokaryotic genomes

Genea

P-valueb

KOc

COGc

Function

ampC

0.000

K01467

V

β-lactamase

ubiE

0.000

-

H

SAM-dependent methyltransferase

rluA

0.000

-

J

Ribosomal large subunit pseudouridylate synthase D

glpF

0.000

-

G

Glycerol uptake facilitator protein

flgL

0.000

-

N

Flagellin

pbp2

0.000

-

M

Penicillin-binding protein

paiB

0.000

K07734

K

Protease synthase and sporulation negative regulatory protein

araJ

0.000

-

G

ABC transporter

baeS

0.000

-

T

Sensor histidine kinase

afuB

0.000

K02011

P

Iron (III) transport system permease protein

ptr2

0.000

-

E

Multidrug resistance protein

ahpF

0.000

K03387

O

Alkyl hydroperoxide reductase, subunit F

COG3708

0.000

-

S

Transcriptional regulator, AraC family

gcd1

0.000

K00966

MJ

GMPP; mannose-1-phosphate guanylyltransferase

COG4653

0.000

-

R

Putative prophage LambdaBa04, major capsid protein

rsuA

0.000

K06183

J

RNA pseudouridine synthase family protein

purR

0.000

-

K

Sugar-binding transcriptional regulator, LacI family

cwlA

0.000

K01447

M

N-acetylmuramoyl-L-alanine amidase

ntrB

0.000

K00936

T

Sporulation kinase

COG1079

0.000

-

R

ABC transporter, permease

rnj

0.000

K12574

R

RNA-metabolising metallo-beta-lactamase

COG3127

0.000

-

Q

ABC transporter, permease

COG1979

0.000

K00100

C

Alcohol dehydrogenase

fepD

0.000

K02015

P

Iron complex transport system permease protein

nupC

0.000

K03317

F

Nucleoside permease NupC

  1. More details are available at http://202.120.45.186/~webserver/kaks/detail.php?jobId=UrK5YPUZE1.
  2. a Only the genes, which have clear function, were listed in this table.
  3. b The P-value shown is the smallest one among different fragments if there is a strong signal of recombination.
  4. c “-” indicates that no functional term was assigned.