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Table 1 Statistics for reconstructed regulons in studied genomes

From: Genomic reconstruction of transcriptional regulatory networks in lactic acid bacteria

Genome TFs Target genes Target operons Regulatory interactions
Streptococcaceae L. lactis cremoris SK11 36 255 125 130
L. lactis lactis Il1403 34 244 128 138
S. thermophilus CNRZ1066 30 263 125 141
S. agalactiae 2603 V/R 38 340 159 186
S. uberis 0140 J 42 330 156 183
S. equi MGCS10565 42 334 143 167
S. dysgalactiae GGS_124 43 356 160 189
S. pyogenes M1 GAS 40 319 150 180
S. gallolyticus UCN34 41 328 167 199
S. mutans UA159 41 317 147 173
S. suis 05ZYH33 43 366 145 173
S. mitis B6 35 305 148 174
S. pneumoniae TIGR4 42 365 167 206
S. gordonii CH1 41 312 167 194
S. sanguinis SK36 43 339 163 191
Total 591 4773 2250 2624
Non-overlapping 1 69 779 397 470
Lactobacillaceae L. sakei 23 K 36 186 92 106
L. casei ATCC 334 41 226 110 120
L. rhamnosus GG 42 237 106 116
L. delbrueckii ATCC BAA-365 18 69 36 37
L. acidophilus NCFM 27 165 80 90
L. helveticus DPC 4571 21 91 53 55
L. johnsonii NCC 533 26 145 78 87
P. pentosaceus ATCC 25745 38 205 97 111
L. brevis ATCC 367 39 217 112 128
L. plantarum WCFS1 46 299 147 170
L. fermentum IFO 3956 30 172 85 101
L. reuteri JCM 1112 32 167 83 96
O. oeni PSU-1 25 109 59 70
L. mesenteroides ATCC 8293 32 202 89 103
L. salivarius UCC118 31 198 86 96
Total 484 2688 1313 1486
  Non-overlapping 1 79 539 289 328
  1. 1Numbers of orthologous groups of TFs, genes and operons in lineage.