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Table 1 The running times and scores for different K values

From: New enumeration algorithm for protein structure comparison and classification

K =

125

250

500

1000

time

1.90

3.57

6.76

12.73

score

8.89

9.08

9.17

9.28

  1. Note for all these testing our approach use the same parameter r = 6.
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BMC Genomics

ISSN: 1471-2164

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