Dataset | Data size | Accuracy (%) | Running Timec |
---|
 |  | iSeeRNA |  | CPCb | iSeeRNA | PhyloCSFd | CPC |
---|
lincRNAs | 2485 | 96.1 | 82.9 | 99.2 | 19.2s | 3270m | 278s |
PCTs | 2432 | 95.3 | 92.0 | 85.2 | 25.7s | 13307m | 309s |
- a PhyloCSF failed to calculate the score for 34 lincRNAs; the accuracy and CPU time were thus calculated based on 2451 lincRNAs.
- b Uniref90 was used as the protein database.
- c m, minute; s, second.
- d To save the running time, we split the comparison dataset and ran PhyloCSF on 20 nodes in parallel. The reported CPU time was the sum of the execution time on all nodes.