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Table 2 TF specific co-occurring cofactor motifs.

From: Cell-type and transcription factor specific enrichment of transcriptional cofactor motifs in ENCODE ChIP-seq data

Target TF Co-occurring motifs (Jaspar and Uniprobe Motif ID) Total
c-Fos MA0419.1, MA0316.1, MA0314.1, MA0315.1, MA0060.1 5
c-Jun MA0419.1, MA0018.2, Atf1 primary, Jundm2 primary 4
c-Myc Sp4 secondary, Zfp161 secondary, MA0324.1, Tcfap2e primary, MA0112.1, Plagl1 primary, MA0374.1, MA0014.1, Tcfap2a secondary, Zic2 primary, Zic3 primary, Zic1 primary, MA0395.1 13
Egr-1 Sp4 secondary, Zfp161 secondary, MA0324.1, MA0375.1, Tcfap2e primary, MA0374.1, MA0014.1, MA0268.1 8
GABP Sp4 secondary, Zfp161 secondary, MA0337.1, MA0324.1, MA0375.1, Tcfap2e primary, MA0048.1, MA0112.1, MA0374.1, MA0014.1, MA0145.1, MA0138.2, Tcfap2a secondary, Zic2 primary, Zic3 primary, Zic1 primary, MA0145.1, Zic2 primary, Tcfap2b primary 19
GATA-1 Mtf1 secondary, Tcfap2e secondary, MA0048.1, Srf secondary, Zfp105 primary, MA0402.1, MA0205.1, Sox13 secondary, Zic2 secondary, Zic1 secondary, Tcfap2a secondary, MA0154.1, Zic3 secondary, MA0057.1 14
GATA-2 Gata6 primary, Gata3 primary 2
MafK MA0419.1, Mtf1 secondary, Tcfap2e secondary, Srf secondary, Zfp105 primary, MA0099.2, MA0150.1, 9
Max Plagl1 primary 1
NFKB MA0364.1, Sox13 secondary, MA0154.1, Zic1 primary 4
SP1 Sp4 secondary, Zfp161 secondary, MA0316.1, MA0315.1, Egr1 secondary, MA0112.1, Plagl1 primary, MA0374.1, MA0014.1, Sox13 secondary, Tcfap2a secondary, 19 MA0314.1, MA0060.1, MA0057.1, MA0395.1, MA0060.1 19
STAT1 Sox13 secondary 1
STAT3 MA0099.1, Jundm2 secondary, MA0272.1, MA0099.2, MA0303.1 5
USF-1 Plagl1 primary, MA0314.1, MA0060.1 3
YY1 Zic2 primary 1
  1. Listed in the table are motifs found consistently enriched within ChIP-seq peaks investigating a particular TF independent of the cell type investigated.