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Table 3 Large-effect QTL associated with feedlot dry matter intake in 4 different beef populations

From: QTLs associated with dry matter intake, metabolic mid-test weight, growth and feed efficiency have little overlap across 4 beef cattle studies

BTA_Mb1

Population

Start SNP

End SNP

Number of SNPs

Genetic variance (%)

Nominal P-value

Bonferroni corrected P-value

Lead-SNP

sPPI2

1_107

Angus

rs137640861

rs133218870

210

1.64

1.52E−5

4.08E−2

rs136742116

0.10

3_70

Hereford

rs134410518

rs136347800

195

4.33

7.23E−8

1.94E−4

rs109239108

0.14

7_0

Angus

rs134214229

rs133987755

219

2.78

9.14E−7

2.45E−3

rs134458731

0.49

7_23

Angus

rs133100477

rs42926834

261

10.39

2.97E−10

7.97E−7

rs133232710

0.44

21_13

Angus

rs109890770

rs137407067

277

1.75

1.09E−5

2.92E−2

rs134953219

0.31

X_115

Hereford

rs109289869

rs133784615

214

1.95

6.20E−6

1.66E−2

rs134244037

0.16

  1. 1Bovine chromosome and nth 1-Mb window within the same chromosome starting at 0 Mb and based on the UMD3.1 assembly.
  2. 2sPPI: posterior probability of inclusion for the given lead-SNP.