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Table 2 Differentially expressed genes (DEGs) involved in phytohormone metabolism and signaling pathway in the comparison between CK and Y (CK-VS-Y)

From: Gene expression profiles responses to aphid feeding in chrysanthemum (Chrysanthemum morifolium)

GeneID

CK-RPKM

Y-RPKM

log2Ratio (Y/CK)

Up-Down-Regulation (Y/CK)

P-value

FDR

Gene description

Unigene107_All

6.80

21.82

1.68

up

6.52E-15

4.23E-13

NPR1-1 protein

Unigene23699_All

23.61

65.91

1.48

up

1.10E-21

1.08E-19

NIM1-like protein 1

Unigene16290_All

28.91

58.50

1.02

up

2.30E-05

0.000575

NIM1-like protein 1

Unigene2058_All

4.07

13.85

1.77

up

4.50E-07

1.47E-05

TGA transcription factor

Unigene3706_All

51.60

135.05

1.39

up

3.28E-68

1.09E-65

TGA transcription factor

Unigene11738_All

5.11

21.60

2.08

up

2.73E-09

1.15E-07

Phospholipase A1

Unigene37023_All

27.84

114.64

2.04

up

5.60E-20

5.05E-18

Phospholipase A1

Unigene45678_All

37.39

154.04

2.04

up

1.38E-107

7.9E-105

Lipoxygenase

Unigene11030_All

62.93

152.57

1.28

up

9.16E-44

1.83E-41

Allene oxide cyclase

Unigene29173_All

85.71

199.13

1.22

up

6.06E-72

2.09E-69

12-oxophytodienoic acid reductase

Unigene11800_All

9.14

133.63

3.87

up

2.29E-105

1.25E-102

Jasmonate ZIM domain-containing protein

Unigene19974_All

25.67

112.38

2.13

up

9.06E-53

2.20E-50

Jasmonate ZIM domain-containing protein

Unigene28971_All

32.55

103.54

1.67

up

2.66E-35

4.12E-33

Jasmonate ZIM domain-containing protein

Unigene14746_All

10.23

30.30

1.57

up

8.59E-10

3.78E-08

MYC2 transcription factor

Unigene19948_All

25.16

67.21

1.42

up

2.18E-25

2.48E-23

MYC2 transcription factor

Unigene17336_All

23.29

56.14

1.27

up

4.61E-23

4.76E-21

MYC2 transcription factor

Unigene28993_All

38.28

88.92

1.22

up

2.33E-18

1.89E-16

MYC2 transcription factor

Unigene3689_All

60.21

26.95

−1.16

down

2.97E-26

3.47E-24

MYC2 transcription factor

Unigene10068_All

55.68

122.23

1.13

up

8.46E-10

3.73E-08

1-aminocyclopropane-1-carboxylate synthase

Unigene38824_All

58.78

121.12

1.04

up

1.10E-08

4.32E-07

1-aminocyclopropane-1-carboxylate synthase

Unigene1735_All

99.27

203.73

1.04

up

8.39E-15

5.38E-13

1-aminocyclopropane-1-carboxylate synthase

Unigene23619_All

12.85

57.09

2.15

up

2.21E-26

2.59E-24

DELLA protein

Unigene21755_All

9.62

43.11

2.16

up

9.28E-12

4.81E-10

DELLA protein

Unigene29632_All

99.04

300.15

1.60

up

6.89E-90

3.08E-87

DELLA protein

Unigene41060_All

39.09

110.66

1.50

up

6.35E-12

3.35E-10

DELLA protein

Unigene21602_All

24.78

54.70

1.14

up

1.41E-28

1.81E-26

DELLA protein

  1. The criteria used for assigning significance were: P-value < 0.05, FDR ≤ 0.001, and absolute |log2Ratio(Y/CK)| ≥ 1. CK: control; Y: aphid infestation treatment.