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Table 3 qPCR analyses of DEGs

From: Early transcriptional changes in the reef-building coral Acropora aspera in response to thermal and nutrient stress

Symbol (C-Coral or A-algae)

GenBank accession number

Annotation

Species with the best BLAST (GenBanAcc)

E-value

Hsp90 (C)

JT002485

Heat shock protein HSP 90-alpha

Rattus norvegicus (P82995)

4.00E-11

GFP (C)

EZ013774

GFP-like fluorescent chromoprotein

Anemonia majano (Q9U6Y6)

3.00E-09

NADH (C)

JT002895

NADH-ubiquinone oxidoreductase

Metridium senile(O47498)

2.00E-10

Tyr (C)

JT013311

Tyrosyl-tRNA synthetase

Danio rerio (Q6TGS6)

2.00E-09

Cyt_c (C)

JT015689

Cytochrome c oxidase subunit 1

Metridium senile (Q35101)

2.00E-11

Rubisco (A)

GAFO01026698

Ribulose bisphosphate carboxylase

Symbiodinium sp. (Q41406)

6.00E-13

Peridinin (A)

JN602625

Peridinin-chlorophyll a-binding protein

Symbiodinium sp. (P51874)

6.00E-11

Car_Chl (A)

FN646420

Caroteno-chlorophyll a-c-binding protein

Amphidinium carterae (P55738)

2.00E-08

  1. GenBank accession number, the best BLASTx (against Swiss-Prot database) and functions of selected highly abundant DEGs based on k-mer analyses used for qPCR analyses.