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Table 4 Gene enrichment analyses

From: Early transcriptional changes in the reef-building coral Acropora aspera in response to thermal and nutrient stress

Significant pathways

Condition

No of genes

No of KEGG genes in pathway

Fold enrichment

Corrected P-value

Ribosome

STE

41

193

3.03

6.90E-09

Proteasome

17

50

3.51

2.30E-03

Ubiquitin mediated proteolysis

32

143

2.26

3.50E-03

Calcium signaling pathway

35

193

2.14

4.70E-03

Citrate cycle (TCA cycle)

16

31

3.17

5.60E-03

Ribosome

LTE

46

193

2.15

1.71E-05

Valine, leucine and isoleucine degradation

25

53

2.37

4.28E-03

Insulin signaling pathway

40

142

1.87

1.14E-02

Ubiquitin mediated proteolysis

37

143

1.90

1.35E-02

Spliceosome

36

136

1.87

2.02E-02

Ribosome

N

47

193

2.61

8.80E-09

Citrate cycle (TCA cycle)

19

31

2.91

5.10E-03

Ubiquitin mediated proteolysis

37

143

2.08

3.50E-03

Valine, leucine and isoleucine degradation

23

53

2.45

3.50E-03

Focal adhesion

40

204

1.92

1.20E-02

Endocytosis

39

236

1.89

1.10E-02

Spliceosome

33

136

2.01

1.70E-02

Lysosome

26

127

2.12

1.70E-02

Insulin signaling pathway

34

142

1.89

4.20E-02

Oocyte meiosis

25

114

2.13

4.40E-02

  1. Gene enrichment analyses for coral samples exposed to thermal and nutrient stress. Significant pathways involved in short (STE), long-thermal (LTE) and nutrient (N) stress response had corrected P-value by Benjamini P < 0.05.