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Table 2 Expression levels of full-length toxin clusters for Hypsiglena sp. based on 10 million reads mapped to coding sequences

From: RNA-seq and high-definition mass spectrometry reveal the complex and divergent venoms of two rear-fanged colubrid snakes

Rank Cluster name Cluster size CDS length Median Coverage % Toxin reads % Total reads
1 CRISP-1a 5 720 92,411 16.684 7.256
2 SVMPIII-4 1 1,836 30,460 11.462 4.985
3 SVMPIII-9a 2 1,833 27,697 10.112 4.398
4 SVMPIII-13a 2 1,836 25,321 10.024 4.360
5 SVMPIII-12a 2 1,830 22,893 8.593 3.737
6 NP-1a 12 474 56,846 7.359 3.201
7 SVMPIII-3a 4 1,860 16,209 5.943 2.585
8 SVMPIII-7a 2 1,857 11,689 4.173 1.815
9 SVMPIII-11a 3 1,845 10,816 3.835 1.668
10 SVMPIII-8a 5 1,845 9,629 3.430 1.492
11 CTL-7a 5 471 32,519 3.382 1.471
12 SVMPIII-6a 3 1,854 7,559 2.727 1.186
13 SVMPIII-5 1 1,833 7,058 2.693 1.171
14 CTL-8a 7 480 25,070 2.633 1.145
15 SVMPIII-10a 4 1,827 4,941 1.687 0.734
16 SVMPIII-2 1 1,827 4,305 1.553 0.675
17 SVMPIII-14a 3 1,839 4,236 1.484 0.645
18 Fused 1 582 8,844 0.960 0.418
19 SVMPIII-1 1 1,857 2,406 0.950 0.413
20 3FTx 1 255 1,357 0.070 0.030
21 CTL-6a 2 480 640 0.060 0.026
22 KUN 1 759 423 0.056 0.024
23 CTL-5 1 477 464 0.042 0.018
24 CTL-1 1 483 304 0.029 0.013
25 CTL-3 1 495 239 0.022 0.010
26 VEGF 1 579 108 0.012 0.005
27 CTL-4 1 483 66 0.006 0.003
28 Waprin 1 405 75 0.006 0.002
29 Ficolin-1 1 1,032 21 0.004 0.002
30 Ficolin-2 1 999 21 0.004 0.002
31 Vespryn 1 558 25 0.003 0.001
32 PDE4 1 1,362 9 0.002 0.001
33 CTL-2 1 531 17 0.002 0.001
  1. Abbreviations: 3FTx–three-finger toxin, CDS–coding sequence, CTL–C-type lectin, CRISP–cysteine-rich secretory protein, KUN-Kunitz-type protease inhibitor, PDE–phosphodiesterase, NP–natriuretic peptide, SVMPIII–snake venom metalloproteinase (P-III), VEGF–vascular endothelial growth factor.