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Table 1 Overview of L. crispatus strains, properties and main findings

From: Comparative genomics of Lactobacillus crispatus suggests novel mechanisms for the competitive exclusion of Gardnerella vaginalis

Strain & accession Scaffolds Plasmid derived contigs Genome size (Mb) Conserved genome (%) CDS Ortholog groups Average CDS length CRISPR/Cas system Prophage clusters GIs Adhesins Comments
125-2-CHN [GenBank:ACPV00000000] 30 0 2.31 86 2082 2050 902 Type II 1 6 9 Vaginal isolate from a healthy Chinese woman
214-1 [GenBank:ADGR00000000] 187 1 2.07 97 2163 2135 847 Type II 2 7 10 Human vaginal isolate
CTV-05 [GenBank:ADML00000000] 25 0 2.36 90 2248 2032 838 Type II 6 8 9 Human vaginal isolate; strong adhesion to vaginal cells; health promoting use in treatment and prevention of BV and RUTI
FB049-03 [GenBank:AGZF00000000] 5 0 2.46 92 2433 2332 848 Type II 3 8 11 Human vaginal isolate
FB077-07 [GenBank:AGZG00000000] 10 1 2.70 84 2643 2516 837 Type II 3 21 13 Human vaginal isolate
JV-V01 [GenBank:ACKR00000000] 86 0 2.22 90 2209 2180 839 Type II 2 5 12 Human vaginal isolate
MV-1A-US [GenBank:ACOG0000000] 45 0 2.31 90 2151 2126 877 Type II 6 8 9 Vaginal isolate from a healthy US woman
MV-3A-US [GenBank:ACQC00000000] 76 0 2.44 89 2330 2275 859 Type II 6 14 9 Vaginal isolate from a healthy US woman
SJ-3C-US* [PATRIC:ADDT00000000] 201 1 2.09 97 2174 2138 821 Type II 1 15 10 Vaginal isolate from a healthy US woman
ST1 [GenBank:NC_014106] 1 0 2.04 82 2022 1957 896 Type I 0 10 11 Chicken isolate; adheres also to human vaginal cells; inhibition of APEC adhesion
  1. *Annotations are derived from PATRIC.
  2. BV: Bacterial vaginosis; RUTI: Recurrent urinary tract infection; APEC: Avian pathogenic Escherichia coli.