SNP | Multiplex PCR primers (5′-3′) | mPCR Reaction | Amplicon fragment length (bp) | Concentration (μM) | |
---|---|---|---|---|---|
 | Forward | Reverse |  |  |  |
BCL11A | Â | Â | Â | Â | Â |
rs11886868, rs766432 | CACACCATGGATGAATCCCAGAα,* | TGGTGCTACCCTGAAAGACGGα,* | B | 441 | 0.1 |
rs4671393, rs7557939 | CCTTGTTTACAGAGGGGCAACCα,* | GCCTTGGGAAGAAAGACAGCATα,* | B | 649 | 0.4 |
rs6732518 | TGGGTGACCCTCTGACTCCT* | GCTTTAACGCACTACACCCCACα,* | A | 69 | 0.1 |
rs10189857 | AGCCATGGTCCACCCACAGAα,* | TTCCAGGTCCCCCAGAAGTAGC* | B | 411 | 0.1 |
rs6545816 | GGTTGATGAGAAAATTACCGCATTAα,* | AACGAGGGTGTTCAAAGTAACCA* | A | 103 | 0.3 |
rs7599488, rs1427407 | CTGGCCGGGAGCATTTCAAα,* | TTTAACCTTCTTAGCACCCACAAA* GCACAGCATGTGACATGATATTCb | B | 515 | 0.6 |
0.5 | |||||
rs10184550 | CCTGATCTCTGATTGTTGCTTTGA* | TGTACCACCAGAAGTCCTGGAAAα,* | A | 120 | 0.4 |
rs7606173 | ACACCCTGTGATCTTGTGGα,* | GCCAACAGTGATAACCAGC* | A | 201 | 0.8 |
rs6706648 | GAAGCTTCCCCTGTCTGCAα,* | TGAGTGCGTATTTGTAAAGTTCC* | A | 333 | 0.6 |
HBS1L-MYB | Â | Â | Â | Â | Â |
rs28384513 | CCTTGAGCTACCTACGCCAG* | CTTTCTCAGATTATCAGGAACCAAATTT* GCCCACTGTGTGCTTAATGAAAb | A | 66 | 0.4 |
0.5 | |||||
rs7776054, rs9399137 | ATATGCAATATTTGTAATTTGTGTTCTGCα,* | TTAACTATATCTGTGCACAGAAATACAGα,* | B | 190 | 0.8 |
rs9389268, rs9402685 | TGCAACCTCCGCTTCCAα,* | TAGCTCACACCTGTAATCATGCα,* | A | 221 | 0.2 |
rs4895441, rs4895440 | GGAAACCAGTTTAGAAAGCGTGG* | TCTCTCTGGATCTCCCTGTCα,* | B | 122 | 0.3 |
rs6929404 | GCAGTGAGATTTCTATTATTAGGCTCα,* | CTGACTAAACTTCTAATCAAAGGCAT* | B | 136 | 0.3 |
rs9402686 | GAGCAGAGAAGTTTAAAGTGTGTG* | TGGACAAAACTGCCCTTTGTCα,* | B | 150 | 0.4 |
rs1320963 | ATGGCTTGGTAAGGACTTAAGAG* | CCTGAGAGTTCTTTTGGGATCTT* | B | 60 | 0.4 |
TTCAACTTTCCACTGAGTTTTCGb | 0.5 | ||||
rs6904897 | ATCCAGGCTTGCCAAATATACCT* | GACTTGCCTGTGCTGGAAATTα,* | A | 99 | 0.3 |
rs35959442 | TGACCCAGAGCGTCCAAGα,* | GTTACATCTGCAGCTGACACC* | A | 160 | 0.8 |
rs9376090 | GATATGGCCAATACCATATGAAGCTAAα,* | AGCTGGGCCTCATTTGTTC* | B | 81 | 0.2 |
rs9494142 | AGGAAGTGTCTTTGGTCTCTCAGα,* | TGAGACTCCATCTCAAAAAACAACA* | A | 143 | 0.4 |
rs11759553 | TTGCCAGGCTGTCTTGCAα,* | GTTCTGCAGGGTCCTTTGG* | B | 107 | 0.2 |
rs6934903 | CCTTGGCCCACATCGCTα,* | TAGAACCTGAAACAGTACTCCACA* | A | 130 | 0.2 |