Table 2 Abundance of homeostasis mechanisms in Frankia
From: The ins and outs of metal homeostasis by the root nodule actinobacterium Frankia
Mechanism Counts in Selected Genomes | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Â | Symbol | Frankia sp.strain CcI3 | Frankiaalni ACN14a | Frankia sp.strain QA3 | Frankia sp.strain EUN1f | Frankia sp.strain EAN1pec | Frankia sp.strain EuI1c | Frankia sp . strain CN3 | Frankia sp.strain DC12 | S. viridochromogenes | B. subtilis168 | C. metallidurans | E . coliK12- W3110 |
Import permeases | CbtA | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 |
CorA | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 3 | 1 | 2 | 1 | |
Ftr1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 0 | |
MgtE | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | |
NhlF | 1 | 1 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 1 | 0 | |
Pit | 0 | 1 | 1 | 1 | 0 | 0 | 1 | 0 | 3 | 1 | 1 | 0 | |
SulP | 3 | 2 | 2 | 4 | 3 | 2 | 3 | 2 | 3 | 2 | 6 | 1 | |
YcnJ | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 0 | 0 | |
Zip | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 1 | |
Import cassettes | CbiMNOQ | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 2 | 1 | 0 | 0 |
CysPUWA | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 1 | 0 | 0 | 1 | 1 | |
FbpABC | 1 | 0 | 1 | 2 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | |
FepBCDG | 0 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 0 | 1 | 1 | |
FhuBCD | 1 | 2 | 1 | 0 | 1 | 0 | 0 | 1 | 1 | 5 | 1 | 2 | |
Mnt/ZnuABC | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 0 | 1 | |
Mod ABC | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | |
PstABCS | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | |
Chaperones storage | BFR | 1 | 3 | 3 | 2 | 2 | 2 | 2 | 1 | 1 | 0 | 2 | 1 |
CbiX | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 3 | 1 | 1 | 0 | |
ChlD | 1 | 1 | 3 | 4 | 2 | 2 | 4 | 2 | 0 | 0 | 1 | 0 | |
ChlI | 2 | 2 | 2 | 3 | 3 | 2 | 2 | 2 | 1 | 0 | 2 | 1 | |
CobN | 1 | 1 | 3 | 2 | 1 | 1 | 2 | 3 | 2 | 0 | 0 | 0 | |
CobW | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 2 | |
CopZ | 1 | 1 | 1 | 3 | 3 | 1 | 2 | 1 | 2 | 1 | 7 | 1 | |
Fe-DPS | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | |
FhuF | 3 | 3 | 3 | 3 | 4 | 1 | 1 | 1 | 4 | 0 | 3 | 1 | |
HypA | 2 | 2 | 2 | 2 | 2 | 1 | 1 | 1 | 1 | 0 | 2 | 2 | |
HypB | 2 | 2 | 2 | 1 | 1 | 0 | 1 | 0 | 1 | 0 | 2 | 1 | |
IscA | 2 | 2 | 2 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 4 | |
ModG | 1 | 2 | 2 | 2 | 2 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | |
MrnA | 0 | 1 | 1 | 0 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | |
SenC | 2 | 3 | 3 | 3 | 2 | 1 | 1 | 2 | 1 | 1 | 3 | 0 | |
UreG | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 0 | |
Modification | ArsC | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 1 | 1 | 3 | 4 | 3 |
GSH | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 1 | 1 | |
MSH | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | |
NasC | 1 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 1 | 1 | 1 | 0 | |
NirB | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 2 | 2 | 1 | |
NirD | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | |
PbrB | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | |
NirA | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | |
SorA | 0 | 0 | 0 | 2 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | |
TrxA | 1 | 1 | 2 | 2 | 1 | 2 | 2 | 1 | 2 | 1 | 2 | 1 | |
TrxB | 2 | 4 | 5 | 3 | 2 | 5 | 4 | 3 | 3 | 4 | 5 | 1 | |
UppP | 2 | 3 | 3 | 3 | 3 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | |
Exporters | ACR3 | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 0 |
AqpS | 1 | 2 | 2 | 2 | 1 | 3 | 2 | 2 | 3 | 1 | 2 | 2 | |
CadD | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
ChrA | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 2 | 1 | 2 | 5 | 0 | |
CopA | 1 | 1 | 1 | 2 | 3 | 1 | 3 | 2 | 2 | 1 | 4 | 1 | |
CopC | 2 | 2 | 2 | 3 | 2 | 2 | 2 | 3 | 2 | 1 | 2 | 1 | |
CopD | 2 | 2 | 2 | 2 | 2 | 3 | 2 | 2 | 3 | 1 | 2 | 1 | |
CorC | 2 | 3 | 3 | 3 | 3 | 2 | 2 | 2 | 4 | 5 | 5 | 6 | |
CzcD | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | |
DUF347 | 2 | 4 | 1 | 2 | 1 | 3 | 3 | 3 | 0 | 0 | 7 | 0 | |
FieF | 1 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 1 | |
NarK | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 2 | 3 | 2 | |
RcnA | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | |
TauZ | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 2 | 1 | |
TehA | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | |
TerC | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 4 | 4 | |
ZnT-9 | 1 | 2 | 2 | 1 | 1 | 1 | 2 | 1 | 2 | 0 | 0 | 0 | |