Genome-wide and molecular evolution analysis of the subtilase gene family in Vitis vinifera

BMC Genomics

Table 2 Estimated functional divergence among grape subtilase paralogs

Comparison	θ¹	SE²	LRT³	N(0.5)⁴	N(0.7)⁴
Group 1/Group 2	0.2792	0.088671	9.914529	17	10
Group 1/Group 3	0.28	0.087154	10.32146	20	6
Group 1/Group 4	0.2912	0.06808	18.29547	16	7
Group 1/Group 5	0.3632	0.050875	50.96668	28	21
Group 1/Group 6	0.21567	0.067419	10.23328	12	3
Group 1/Group 7	0.5504	0.137436	16.03827	102	14
Group 1/Group 8	0.2728	0.10368	6.92308	15	1
Group 2/Group 3	0.1944	0.066691	8.496944	7	2
Group 2/Group 4	0.2512	0.082217	9.335067	15	1
Group 2/Group 5	0.276	0.060202	21.01797	19	7
Group 2/Group 6	0.1576	0.049559	10.11273	9	3
Group 2/Group 7	0.4504	0.118338	14.48608	55	11
Group 2/Group 8	0.3208	0.089774	12.76937	55	5
Group 3/Group 4	0.0872	0.080381	1.176859	1	0
Group 3/Group 5	0.2528	0.04788	27.87704	14	9
Group 3/Group 6	0.3448	0.066534	26.85637	28	11
Group 3/Group 7	0.324	0.12143	7.119362	17	1
Group 3/Group 8	0.1432	0.103001	1.932856	1	0
Group 4/Group 5	0.2176	0.044709	23.68793	16	3
Group 4/Group 6	0.196	0.057016	11.81738	10	3
Group 4/Group 7	0.244	0.122626	3.959267	6	1
Group 4/Group 8	0.384	0.100291	14.66027	33	4
Group 5/Group 6	0.2744	0.038394	51.07865	19	12
Group 5/Group 7	0.2984	0.070052	18.14476	19	6
Group 5/Group 8	0.4992	0.078199	40.75143	74	24
Group 6/Group 7	0.4488	0.102943	19.0071	51	16
Group 6/Group 8	0.300968	0.079995	14.15512	21	2
Group 7/Group 8	0.5048	0.140123	12.97829	86	16

¹θ is the coefficient of functional divergence.
²SE: standard error.
³LRT is a likelihood ratio test.
⁴N(0.5) and N(0.7) indicate the numbers of divergent residues when the cut-off values were 0.5 and 0.7, respectively.

ISSN: 1471-2164