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Table 2 Number of candidate alkane hydroxylases observed in each of the psychrophile and mesophile genomes examined

From: Alkane hydroxylase genes in psychrophile genomes and the potential for cold active catalysis

Strain Pair Accession LadA AlmA AlkB Uncharacterized AlkB-like Bacterial p450 Eukaryotic p450
Psychrophiles         
1Aeromonas salmonicida A449 A CP000644 0 0 0 0 0 0
1Aliivibrio salmonicida LFI1238 B FM178379 0 0 0 0 0 0
2Colwellia psychrerythraea 34H C CP000083 0 0 0 0 0 0
3Desulfotalea psychrophila LSv54 D CR522870 0 0 0 0 0 0
1Flavobacterium psychrophilum JIP02 86 E AM398681 0 0 0 0 0 0
4 Glaciecola psychrophila 170 F CP003837 0 5 0 1 1 0
5Methanococcoides burtonii DSM 6242 G CP000300 0 0 0 0 0 0
4 Octadecabacter antarcticus 307 H CP003740 1 0 2 2 1 1
4 Octadecabacter arcticus 238 I CP003742 1 0 2 1 1 1
6 Photobacter profundum SS9 J CR354532 0 0 0 0 0 1
7Pseudoalteromonas haloplanktis TAC125 K CR954246 0 0 0 0 0 0
3Psychrobacter arcticum 273-4 L CP000082 0 0 0 0 0 0
3 Psychrobacter cryohalolentis K5 M CP000323 0 1 0 0 0 0
4 Psychroflexus torquis ATCC700755 N CP003879 0 0 0 0 0 1
4Psychromonas CNPT3 O CP004404 0 0 0 0 0 0
6Psychromonas ingrahamii 37 P CP000510 0 0 0 0 0 0
7Shewanella halifaxensis HAW EB4 Q CP000931 0 0 0 0 0 0
2Shewanella sediminis HAW-EB3 R CP000821 0 0 0 0 0 0
6Shewanella violacea DSS12 S AP011177 0 0 0 0 0 0
8 Terroglobus saanensis SP1PR4 T CP002467 1 0 0 0 2 1
Mesophiles         
Aeromonas veronii B565 A CP002607 0 0 0 0 0 0
Vibrio fischeri ES114 B CP000020 0 0 0 0 0 0
Alteromonas macleodii Deep ecotype C CP001103 0 1 0 0 0 0
Desulfocapsa sulfexigens DSM 10523 D CP003985 0 0 0 0 0 0
Flavobacterium indicum GPTSA100 9 E HE774682 0 0 0 0 0 0
Glaciecola agarilytica 4H37Ye5 F CP002526 0 1 0 0 3 0
Methanosarcina mazei Tuc01 G CP004144 0 0 0 0 0 0
Rhodobacter sphaeroides ATCC 17025 H CP000661 0 0 1 0 1 0
Ketogulonicigenium vulgare Y25 I CP002224 0 1 0 0 0 1
Vibrio vulnificus YJ016 J AP005352 0 0 0 0 0 0
Pseudoalteromonas atlantica T6c K CP000388 0 0 0 0 1 0
Acinetobacter baumannii ACICU L CP000863 2 4 1 1 0 0
Acinetobacter baumannii AYE M CU459141 2 6 1 1 0 0
Flavobacteriales bacterium HTCC2170 N CP002157 0 0 1 0 0 0
Marinobacter aquaeolei VT8 O CP000514 0 3 3 1 2 0
Alteromonas macleodii English Channel ecotype P CP003844 0 1 0 0 0 0
Shewanella MR-7 Q CP000444 0 0 0 0 0 0
Shewanella denitrificans OS217 R CP000302 0 1 0 0 0 0
Shewanella putrefaciens 200 S CP002457 0 0 0 0 0 0
Terriglobus roseus DSM18391 T CP003379 0 0 0 0 0 1
  1. Letters in the pair column indicate the taxonomic match used for the pairwise analysis. Strains with putative alkane hydroxylase genes indicated by bold.
  2. Isolation environments for psychrophile strains are: 1metazoan host, 2sediment, 3permafrost, 4sea ice, 5saline lake, 6deep sea, 7surface seawater, 8tundra soil.