DHL921 | C-8362 | |||||||
---|---|---|---|---|---|---|---|---|
Whole genome | R-genes region | Whole genome | R-genes region | |||||
CM3.5 | Improved | CM3.5a | Improvedb | CM3.5 | Improved | CM3.5a | CM3.6.1b | |
Changes/kb | 1 | 0.5 | 4.1 | 0.25 | 12.2 | 12 | 8.9 | 9.5 |
Variants | 365,012 | 193,146 | 3,085 | 180 | 4,482,184 | 4,455,971 | 6,761 | 7,219 |
SNPs | ||||||||
Homo | 18,606 | 15,867 | 2,106 | 21 | 3,463,344 | 3,488,405 | 5,311 | 5,631 |
Hetero | 77,841 | 63,846 | 261 | 112 | 424,469 | 416,645 | 522 | 685 |
Insertions | ||||||||
Homo | 90,809 | 45,563 | 254 | 31 | 244,983 | 242,498 | 390 | 415 |
Hetero | 1,992 | 2,115 | 12 | 2 | 11,240 | 12,037 | 16 | 23 |
Deletions | ||||||||
Homo | 172,138 | 62,162 | 429 | 7 | 323,714 | 271,219 | 510 | 442 |
Hetero | 3,570 | 3,576 | 23 | 7 | 14,380 | 15,136 | 12 | 23 |
Effects in genes | ||||||||
Missense | 1,469 | -c | 125d | 2d | 62,321 | -c | 393d | 520d |
Nonsense | 54 | -c | 4d | 0d | 1,461 | -c | 2d | 6d |
Silent | 934 | -c | 97d | 5d | 62,200 | -c | 210d | 249d |
Exons | 4,317 | -c | 232d | 7d | 131,515 | -c | 625d | 800d |
Introns | 50,688 | -c | 118d | 12d | 526,990 | -c | 309d | 496d |
Splice sites | 700 | -c | 5d | 0d | 8,809 | -c | 8d | 15d |