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Table 4 Expression data support of R-genes

From: Interspecific and intraspecific gene variability in a 1-Mb region containing the highest density of NBS-LRR genes found in the melon genome

Gene

ICUGI Genea

ICUGI Unigene

Cultivar

Library

Cucumber

    

91460.1

Csa2M022790.1

-

  

91470.1

Csa2M022270.1

CU122153

Vlaspik

Fruit (mixed, 1–50 DAP)

CU171360

WI 1983H

 

91680.1

Csa2M021540.1

-

  

91690.1

Csa2M021520.1

-

  

91710.1

Csa2M021510.1

-

  

91780.1

Csa2M020940.1

CU141826

WI 1983H

Hermaphrodite flower

CU173837

WI 1983H

Hermaphrodite flower

91820.1

Csa2M020890.1

CU134688

WI 1983G

Gynoecious flower

91840.1

Csa2M020870.1

CU162592

WI 1983H

Hermaphrodite flower

91880.1

Csa2M014830.1

-

  

Melon

    

MELO3C004258

 

-

  

MELO3C004259

 

MU66045

T-111

Callus

MELO3C004260

 

-

  

MELO3C004262

 

-

  

MELO3C004266

 

-

  

MELO3C004288

 

-

  

MELO3C004289

 

MU63434

PI161375

Callus

MELO3C004290

 

-

  

MELO3C004291

 

-

  

MELO3C004292

 

-

  

MELO3C004294

 

MU53509

pat81

Root (healthy)

 

Root (infected, M. cannonballus)

MELO3C004295

 

-

  

MELO3C004301

 

MU66172

T-111

Callus

MELO3C004302-3

 

MU53927

PI161375

Callus

MELO3C004309-10

 

-

  

MELO3C004311

 

MU43621

PI161375

Callus

 

Cantaloupe C-35

CMV Cotyledon infected

 

MU48550

PI161375

Callus

MELO3C004312

 

MU52721

PI161375

Callus

 

Dulce

Mixed Fruit (4 devel. stages)

 

MU54890

T-111

Fruit (15 DAP)

MELO3C004313

 

MU67511

Védrantais

Callus

MELO3C004317

 

-

  

MELO3C004318

 

MU61424

Cantaloupe C-35

Healthy leaf

MELO3C004319

 

-

  

MELO3C004320

 

MU55681

T-111

Fruit (46 DAP)

MELO3C004321

 

MU63490

PI161375

Callus

MELO3C004323

 

-

  

MELO3C004324

 

-

  

Watermelon

    

Cla019863

 

WMU41608

97103

Fruit (10 DAP)

 

WMU77867

97103

Fruit (34 DAP)

 

WMU45091

97103

Fruit (18 DAP) & Fruit (26 DAP)

Cla019857

 

WMU48640

97103

Fruit (10 DAP)

Cla019856

 

-

  

Cla019855

 

-

  

Cla019854

 

-

  

Cla019850

 

WMU79003

Illinwake Red

Norm. and subst. library

 

(Mix 12, 24, 36 DAP flesh fruit; driver: leaf)

  1. aCucumber gene annotation used is taken from Phytozome (Gy14 cultivar draft genome) while the genome assembly deposited at ICUGI is that of the cucumber 9930 inbred line.