Table 1 High-confidence mutations in SH-SY5Y that were rare in the population and also confirmed as somatic in the COSMIC database
Chromosome:begin-end | COSMIC ID (tissue type) | Genes (or adjacent genes) |
|---|---|---|
2:174118525-174118526 | 140009 (skin) | MLK7-AS1 |
3:3965330-3965331 | 146267 (haematopoietic_and_lymphoid_tissue) | LRRN1(dist = 75944), SETMAR(dist = 379657) |
3:97631173-97631174 | 166940 (large_intestine) | ARL6(dist = 113801), MINA(dist = 29487) |
3:97680355-97680356 | 166941 (large_intestine) | MINA |
3:195017896-195017897 | 212624 (breast) | ACAP2 |
4:62000660-62000661 | 200267 (large_intestine) | LOC255130 (dist = 3929195), LPHN3(dist = 362178) |
5:40086690-40086691 | 145684 (haematopoietic_and_lymphoid_tissue) | DAB2(dist = 661356), PTGER4(dist = 593341) |
6:35837057-35837058 | 167752 (large_intestine) | SRPK1 |
6:152632032-152632033 | 167911 (large_intestine) | SYNE1 |
6:168431497-168431498 | 85018 (pancreas) | KIF25 |
7:127075991-127075992 | 200565 (large_intestine) | ZNF800(dist = 43225), GCC1(dist = 144690) |
8:27913552-27913553 | 1098826, 1098827 (endometrium) | C8orf80 |
8:38006195-38006196 | 187133 (large_intestine) | STAR |
9:6254465-6254466 | 1109518 (endometrium) | IL33 |
11:57734912-57734913 | 146001 (haematopoietic_and_lymphoid_tissue, large_intestine) | TMX2-CTNND1(dist = 148261), OR9Q1(dist = 56440) |
12:7585976-7585977 | 179792 (large_intestine) | CD163L1 |
12:11905442-11905443 | 180918 (large_intestine) | ETV6 |
12:88344608-88344609 | 433706 (breast) | MKRN9P(dist = 166121), C12orf50(dist = 29207) |
14:72128130-72128131 | 195414 (large_intestine) | SIPA1L1 |
16:12798881-12798882 | 1202185 (large_intestine) | CPPED1 |
19:11134250-11134251 | 1161250, 1161251 (haematopoietic_and_lymphoid_tissue) | SMARCA4 |
X:47039372-47039373 | 1121715 (endometrium) | RBM10 |
X:104440586-104440587 | 487453 (kidney) | IL1RAPL2 |